Genomics
Genome feature
| Region: |
exon
|
Length: |
470
 |
| Location: | Chr5:20583352-20583821 reverse strand | ||
| Transcript | Exons | Introns | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
SPL13A
AT5G50570.2
2308 |
|
|
||||||||||||||
|
SPL13A
AT5G50570.1
1938 |
|
|
Overlapping Features
Genome features that overlap coordinates of this Exon
CDSs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT5G50570:CDS:1 |
440
|
Chr5: 20583352-20583791 | Arabidopsis thaliana |
| AT5G50570:CDS:1.1 |
440
|
Chr5: 20583352-20583791 | Arabidopsis thaliana |
Exons
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT5G50570:exon:2 |
1196
|
Chr5: 20583352-20584547 | Arabidopsis thaliana |
Five Prime UTRs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT5G50570:five_prime_UTR:2 |
756
|
Chr5: 20583792-20584547 | Arabidopsis thaliana |
| AT5G50570:five_prime_UTR:3 |
30
|
Chr5: 20583792-20583821 | Arabidopsis thaliana |
Genes
| DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
|---|---|---|---|---|---|---|---|---|---|---|
| AT5G50570 | locus:2159717 | SPL13A | SQUAMOSA PROMOTER-BINDING PROTEIN LIKE 13A |
2639
|
Chr5: 20582083-20584721 | A. thaliana | Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein;(source:Araport11) | Together with SPL13B involved in floral transition. Expression reduced by Verticillium dahliae SRNAs which affects the plant's miR157d which targets SPL13A and B. | Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein | SPL13, SPL13A |
mRNAs
| DB identifier | Length | Chromosome Location |
|---|---|---|
| AT5G50570.2 |
2308
|
Chr5: 20582083-20584547 |
| AT5G50570.1 |
1938
|
Chr5: 20582083-20584721 |
