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Genomics
Genome feature
Region:
gene
Length:
2363
Location:
Chr5:4478787-4481149
reverse strand
Genes
DB identifier
Secondary Identifier
Symbol
Name
Length
Chromosome Location
Organism . Short Name
TAIR Computational Description
TAIR Curator Summary
TAIR Short Description
TAIR Aliases
AT5G13887
locus:4515103562
MIR848A
microRNA848A
195
Chr5: 4479397-4479591
A. thaliana
microRNA ath-MIR848 precursor;(source:Araport11)
Encodes a microRNA of unknown function. MicroRNAs are regulatory RNAs with a mature length of ~21-nucleotides that are processed from hairpin precursors by Dicer-like enzymes. MicroRNAs can negatively regulate gene expression by attenuating translation or by directing mRNA cleavage. Mature sequence: UGACAUGGGACUGCCUAAGCUA
MIR848a; miRNA
MIR848A
AT5G13900
locus:2159053
AT5G13900
829
Chr5: 4481122-4481950
A. thaliana
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11)
NULL
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
LTPG30
miRNAs
DB identifier
Length
Chromosome Location
ath-miR848
22
Chr5: 4479448-4479469
miRNA Primary Transcripts
DB identifier
Length
Chromosome Location
AT5G13887.1
195
Chr5: 4479397-4479591
1 Downstream Intergenic Region
0 Upstream Intergenic Region
Function
Gene Ontology
cellular component
membrane
ECO
molecular function
No terms in this category.
biological process
No terms in this category.
Interactions
Interaction Network
Show the following interaction types:
Genetic All Physical
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Expression
Data Source:
Abiotic Stress
Abiotic Stress II
Biotic Stress
Biotic Stress II
Chemical
DNA Damage
Development RMA
Developmental Map
Developmental Mutants
Embryo
Germination
Guard Cell
Hormone
Klepikova Atlas
Lateral Root Initiation
Light Series
Natural Variation
Regeneration
Root
Root II
Seed
Shoot Apex
Silique
Tissue Specific
Querying ATTED Service...
Data Source: ATTED-II