Genomics
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G03330:CDS:1 | 376 | Chr5: 807728-808103 | Arabidopsis thaliana |
AT5G03330:CDS:2 | 170 | Chr5: 808190-808359 | Arabidopsis thaliana |
AT5G03330:CDS:3 | 74 | Chr5: 808436-808509 | Arabidopsis thaliana |
AT5G03330:CDS:4 | 55 | Chr5: 808587-808641 | Arabidopsis thaliana |
AT5G03330:CDS:5 | 75 | Chr5: 808740-808814 | Arabidopsis thaliana |
AT5G03330:CDS:6 | 74 | Chr5: 808909-808982 | Arabidopsis thaliana |
AT5G03330:CDS:7 | 49 | Chr5: 809067-809115 | Arabidopsis thaliana |
AT5G03330:CDS:8 | 85 | Chr5: 809217-809301 | Arabidopsis thaliana |
AT5G03330:CDS:10 | 57 | Chr5: 809400-809456 | Arabidopsis thaliana |
AT5G03330:CDS:11 | 56 | Chr5: 809553-809608 | Arabidopsis thaliana |
AT5G03330:CDS:1.1 | 376 | Chr5: 807728-808103 | Arabidopsis thaliana |
AT5G03330:CDS:2.1 | 170 | Chr5: 808190-808359 | Arabidopsis thaliana |
AT5G03330:CDS:3.1 | 74 | Chr5: 808436-808509 | Arabidopsis thaliana |
AT5G03330:CDS:4.1 | 55 | Chr5: 808587-808641 | Arabidopsis thaliana |
AT5G03330:CDS:5.1 | 75 | Chr5: 808740-808814 | Arabidopsis thaliana |
AT5G03330:CDS:6.1 | 74 | Chr5: 808909-808982 | Arabidopsis thaliana |
AT5G03330:CDS:7.1 | 49 | Chr5: 809067-809115 | Arabidopsis thaliana |
AT5G03330:CDS:9 | 186 | Chr5: 809217-809402 | Arabidopsis thaliana |
AT5G03330:CDS:1.2 | 376 | Chr5: 807728-808103 | Arabidopsis thaliana |
AT5G03330:CDS:2.2 | 170 | Chr5: 808190-808359 | Arabidopsis thaliana |
AT5G03330:CDS:3.2 | 74 | Chr5: 808436-808509 | Arabidopsis thaliana |
AT5G03330:CDS:4.2 | 55 | Chr5: 808587-808641 | Arabidopsis thaliana |
AT5G03330:CDS:5.2 | 75 | Chr5: 808740-808814 | Arabidopsis thaliana |
AT5G03330:CDS:6.2 | 74 | Chr5: 808909-808982 | Arabidopsis thaliana |
AT5G03330:CDS:7.2 | 49 | Chr5: 809067-809115 | Arabidopsis thaliana |
AT5G03330:CDS:8.1 | 85 | Chr5: 809217-809301 | Arabidopsis thaliana |
AT5G03330:CDS:10.1 | 57 | Chr5: 809400-809456 | Arabidopsis thaliana |
AT5G03330:CDS:11.1 | 56 | Chr5: 809553-809608 | Arabidopsis thaliana |
AT5G03330:CDS:1.3 | 376 | Chr5: 807728-808103 | Arabidopsis thaliana |
AT5G03330:CDS:2.3 | 170 | Chr5: 808190-808359 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G03330:exon:1 | 276 | Chr5: 806964-807239 | Arabidopsis thaliana |
AT5G03330:exon:3 | 395 | Chr5: 807709-808103 | Arabidopsis thaliana |
AT5G03330:exon:14 | 849 | Chr5: 809553-810401 | Arabidopsis thaliana |
AT5G03330:exon:10 | 85 | Chr5: 809217-809301 | Arabidopsis thaliana |
AT5G03330:exon:12 | 57 | Chr5: 809400-809456 | Arabidopsis thaliana |
AT5G03330:exon:2 | 877 | Chr5: 807227-808103 | Arabidopsis thaliana |
AT5G03330:exon:4 | 170 | Chr5: 808190-808359 | Arabidopsis thaliana |
AT5G03330:exon:5 | 74 | Chr5: 808436-808509 | Arabidopsis thaliana |
AT5G03330:exon:6 | 55 | Chr5: 808587-808641 | Arabidopsis thaliana |
AT5G03330:exon:7 | 75 | Chr5: 808740-808814 | Arabidopsis thaliana |
AT5G03330:exon:8 | 74 | Chr5: 808909-808982 | Arabidopsis thaliana |
AT5G03330:exon:9 | 49 | Chr5: 809067-809115 | Arabidopsis thaliana |
AT5G03330:exon:11 | 240 | Chr5: 809217-809456 | Arabidopsis thaliana |
AT5G03330:exon:13 | 265 | Chr5: 809553-809817 | Arabidopsis thaliana |
AT5G03340:exon:5 | 570 | Chr5: 809830-810399 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G03330:five_prime_UTR:1 | 276 | Chr5: 806964-807239 | Arabidopsis thaliana |
AT5G03330:five_prime_UTR:3 | 19 | Chr5: 807709-807727 | Arabidopsis thaliana |
AT5G03330:five_prime_UTR:2 | 501 | Chr5: 807227-807727 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G03330 | locus:2142659 | AT5G03330 | 3438 | Chr5: 806964-810401 | A. thaliana | Cysteine proteinases superfamily protein;(source:Araport11) | NULL | Cysteine proteinases superfamily protein | ||
AT5G03340 | locus:2831844 | AtCDC48C | cell division cycle 48C | 3464 | Chr5: 809830-813293 | A. thaliana | ATPase, AAA-type, CDC48 protein;(source:Araport11) | NULL | ATPase, AAA-type, CDC48 protein | AtCDC48C |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G03330.1 | 2159 | Chr5: 806964-810401 |
AT5G03330.2 | 1781 | Chr5: 807227-809817 |
AT5G03330.4 | 1879 | Chr5: 807227-809817 |
AT5G03340.1 | 2854 | Chr5: 809830-813293 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G03330:three_prime_UTR:5 | 793 | Chr5: 809609-810401 | Arabidopsis thaliana |
AT5G03330:three_prime_UTR:3 | 849 | Chr5: 809553-810401 | Arabidopsis thaliana |
AT5G03330:three_prime_UTR:4 | 209 | Chr5: 809609-809817 | Arabidopsis thaliana |
AT5G03330:three_prime_UTR:1 | 54 | Chr5: 809403-809456 | Arabidopsis thaliana |
AT5G03330:three_prime_UTR:2 | 265 | Chr5: 809553-809817 | Arabidopsis thaliana |
AT5G03340:three_prime_UTR:1 | 261 | Chr5: 809830-810090 | Arabidopsis thaliana |