Genomics
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G30490:CDS:14 | 61 | Chr4: 14899226-14899286 | Arabidopsis thaliana |
AT4G30490:CDS:13 | 194 | Chr4: 14899373-14899566 | Arabidopsis thaliana |
AT4G30490:CDS:12 | 89 | Chr4: 14899659-14899747 | Arabidopsis thaliana |
AT4G30490:CDS:11 | 91 | Chr4: 14899828-14899918 | Arabidopsis thaliana |
AT4G30490:CDS:10 | 132 | Chr4: 14900015-14900146 | Arabidopsis thaliana |
AT4G30490:CDS:9 | 57 | Chr4: 14900236-14900292 | Arabidopsis thaliana |
AT4G30490:CDS:8 | 93 | Chr4: 14900372-14900464 | Arabidopsis thaliana |
AT4G30490:CDS:7 | 66 | Chr4: 14900547-14900612 | Arabidopsis thaliana |
AT4G30490:CDS:6 | 87 | Chr4: 14900708-14900794 | Arabidopsis thaliana |
AT4G30490:CDS:5 | 70 | Chr4: 14900896-14900965 | Arabidopsis thaliana |
AT4G30490:CDS:4 | 123 | Chr4: 14901042-14901164 | Arabidopsis thaliana |
AT4G30490:CDS:3 | 101 | Chr4: 14901259-14901359 | Arabidopsis thaliana |
AT4G30490:CDS:2 | 80 | Chr4: 14901471-14901550 | Arabidopsis thaliana |
AT4G30490:CDS:1 | 250 | Chr4: 14901634-14901883 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G30480:exon:8 | 300 | Chr4: 14898822-14899121 | Arabidopsis thaliana |
AT4G30490:exon:14 | 253 | Chr4: 14899034-14899286 | Arabidopsis thaliana |
AT4G30490:exon:13 | 194 | Chr4: 14899373-14899566 | Arabidopsis thaliana |
AT4G30490:exon:12 | 89 | Chr4: 14899659-14899747 | Arabidopsis thaliana |
AT4G30490:exon:11 | 91 | Chr4: 14899828-14899918 | Arabidopsis thaliana |
AT4G30490:exon:10 | 132 | Chr4: 14900015-14900146 | Arabidopsis thaliana |
AT4G30490:exon:9 | 57 | Chr4: 14900236-14900292 | Arabidopsis thaliana |
AT4G30490:exon:8 | 93 | Chr4: 14900372-14900464 | Arabidopsis thaliana |
AT4G30490:exon:7 | 66 | Chr4: 14900547-14900612 | Arabidopsis thaliana |
AT4G30490:exon:6 | 87 | Chr4: 14900708-14900794 | Arabidopsis thaliana |
AT4G30490:exon:5 | 70 | Chr4: 14900896-14900965 | Arabidopsis thaliana |
AT4G30490:exon:4 | 123 | Chr4: 14901042-14901164 | Arabidopsis thaliana |
AT4G30490:exon:3 | 101 | Chr4: 14901259-14901359 | Arabidopsis thaliana |
AT4G30490:exon:2 | 80 | Chr4: 14901471-14901550 | Arabidopsis thaliana |
AT4G30490:exon:1 | 511 | Chr4: 14901634-14902144 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G30490:five_prime_UTR:1 | 261 | Chr4: 14901884-14902144 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT4G30480 | locus:2118776 | TPR1 | tetratricopeptide repeat 1 | 1776 | Chr4: 14897346-14899121 | A. thaliana | Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) | Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808). Interacts with Hsp90/Hsp70 as co-chaperone. | Tetratricopeptide repeat (TPR)-like superfamily protein | AtTPR1, TPR1 |
AT4G30490 | locus:2118786 | AT4G30490 | 3111 | Chr4: 14899034-14902144 | A. thaliana | AFG1-like ATPase family protein;(source:Araport11) | NULL | AFG1-like ATPase family protein |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G30480.3 | 1176 | Chr4: 14897346-14899121 |
AT4G30480.2 | 1165 | Chr4: 14897353-14899121 |
AT4G30480.1 | 1210 | Chr4: 14897353-14899121 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G30480:three_prime_UTR:5 | 184 | Chr4: 14898938-14899121 | Arabidopsis thaliana |
AT4G30480:three_prime_UTR:4 | 300 | Chr4: 14898822-14899121 | Arabidopsis thaliana |
AT4G30490:three_prime_UTR:1 | 192 | Chr4: 14899034-14899225 | Arabidopsis thaliana |