Genomics
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G30480:CDS:1 | 294 | Chr4: 14897500-14897793 | Arabidopsis thaliana |
AT4G30480:CDS:3 | 187 | Chr4: 14897975-14898161 | Arabidopsis thaliana |
AT4G30480:CDS:4 | 5 | Chr4: 14898250-14898254 | Arabidopsis thaliana |
AT4G30480:CDS:1.1 | 294 | Chr4: 14897500-14897793 | Arabidopsis thaliana |
AT4G30480:CDS:2 | 183 | Chr4: 14897975-14898157 | Arabidopsis thaliana |
AT4G30480:CDS:5 | 127 | Chr4: 14898250-14898376 | Arabidopsis thaliana |
AT4G30480:CDS:7 | 114 | Chr4: 14898580-14898693 | Arabidopsis thaliana |
AT4G30480:CDS:8 | 116 | Chr4: 14898822-14898937 | Arabidopsis thaliana |
AT4G30480:CDS:1.2 | 294 | Chr4: 14897500-14897793 | Arabidopsis thaliana |
AT4G30480:CDS:2.1 | 183 | Chr4: 14897975-14898157 | Arabidopsis thaliana |
AT4G30480:CDS:5.1 | 127 | Chr4: 14898250-14898376 | Arabidopsis thaliana |
AT4G30480:CDS:6 | 23 | Chr4: 14898535-14898557 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G30480:exon:1 | 448 | Chr4: 14897346-14897793 | Arabidopsis thaliana |
AT4G30480:exon:4 | 187 | Chr4: 14897975-14898161 | Arabidopsis thaliana |
AT4G30480:exon:7 | 114 | Chr4: 14898580-14898693 | Arabidopsis thaliana |
AT4G30480:exon:2 | 441 | Chr4: 14897353-14897793 | Arabidopsis thaliana |
AT4G30480:exon:3 | 183 | Chr4: 14897975-14898157 | Arabidopsis thaliana |
AT4G30480:exon:5 | 127 | Chr4: 14898250-14898376 | Arabidopsis thaliana |
AT4G30480:exon:6 | 159 | Chr4: 14898535-14898693 | Arabidopsis thaliana |
AT4G30480:exon:8 | 300 | Chr4: 14898822-14899121 | Arabidopsis thaliana |
AT4G30490:exon:14 | 253 | Chr4: 14899034-14899286 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G30480:five_prime_UTR:1 | 154 | Chr4: 14897346-14897499 | Arabidopsis thaliana |
AT4G30480:five_prime_UTR:2 | 147 | Chr4: 14897353-14897499 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT4G30480 | locus:2118776 | TPR1 | tetratricopeptide repeat 1 | 1776 | Chr4: 14897346-14899121 | A. thaliana | Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) | Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808). Interacts with Hsp90/Hsp70 as co-chaperone. | Tetratricopeptide repeat (TPR)-like superfamily protein | AtTPR1, TPR1 |
AT4G30490 | locus:2118786 | AT4G30490 | 3111 | Chr4: 14899034-14902144 | A. thaliana | AFG1-like ATPase family protein;(source:Araport11) | NULL | AFG1-like ATPase family protein |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G30480.3 | 1176 | Chr4: 14897346-14899121 |
AT4G30480.2 | 1165 | Chr4: 14897353-14899121 |
AT4G30490.1 | 1947 | Chr4: 14899034-14902144 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G30480:three_prime_UTR:1 | 122 | Chr4: 14898255-14898376 | Arabidopsis thaliana |
AT4G30480:three_prime_UTR:3 | 114 | Chr4: 14898580-14898693 | Arabidopsis thaliana |
AT4G30480:three_prime_UTR:5 | 184 | Chr4: 14898938-14899121 | Arabidopsis thaliana |
AT4G30480:three_prime_UTR:2 | 136 | Chr4: 14898558-14898693 | Arabidopsis thaliana |
AT4G30480:three_prime_UTR:4 | 300 | Chr4: 14898822-14899121 | Arabidopsis thaliana |
AT4G30490:three_prime_UTR:1 | 192 | Chr4: 14899034-14899225 | Arabidopsis thaliana |