Genomics
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs: 7, Exons: 7, Five Prime UTR: 1, Gene: 1, Three Prime UTR: 1, Transposable Elements: 2, Transposon Fragments: 2
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G02940:CDS:1 | 559 | Chr4: 1306658-1307216 | Arabidopsis thaliana |
AT4G02940:CDS:2 | 146 | Chr4: 1309139-1309284 | Arabidopsis thaliana |
AT4G02940:CDS:3 | 118 | Chr4: 1309364-1309481 | Arabidopsis thaliana |
AT4G02940:CDS:4 | 123 | Chr4: 1309557-1309679 | Arabidopsis thaliana |
AT4G02940:CDS:5 | 116 | Chr4: 1309770-1309885 | Arabidopsis thaliana |
AT4G02940:CDS:6 | 155 | Chr4: 1309964-1310118 | Arabidopsis thaliana |
AT4G02940:CDS:7 | 493 | Chr4: 1310207-1310699 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G02940:exon:1 | 904 | Chr4: 1306313-1307216 | Arabidopsis thaliana |
AT4G02940:exon:2 | 146 | Chr4: 1309139-1309284 | Arabidopsis thaliana |
AT4G02940:exon:3 | 118 | Chr4: 1309364-1309481 | Arabidopsis thaliana |
AT4G02940:exon:4 | 123 | Chr4: 1309557-1309679 | Arabidopsis thaliana |
AT4G02940:exon:5 | 116 | Chr4: 1309770-1309885 | Arabidopsis thaliana |
AT4G02940:exon:6 | 155 | Chr4: 1309964-1310118 | Arabidopsis thaliana |
AT4G02940:exon:7 | 832 | Chr4: 1310207-1311038 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G02940:five_prime_UTR:1 | 345 | Chr4: 1306313-1306657 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT4G02940 | locus:2139345 | AT4G02940 | 4726 | Chr4: 1306313-1311038 | A. thaliana | oxidoreductase, 2OG-Fe(II) oxygenase family protein;(source:Araport11) | ALKBH10B is a functional RNA N6-methyladenosine demethylase. Reduction in ALKBH10B decreases m6A levels, and affects the stability of flowering time genes including FT, SPL3 and SPL9. Mutant plants are early flowering. | oxidoreductase, 2OG-Fe(II) oxygenase family protein | ALKBH10B |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G02940:three_prime_UTR:1 | 339 | Chr4: 1310700-1311038 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4TE06680 | 3403 | Chr4: 1304921-1308323 | Arabidopsis thaliana |
AT4TE06685 | 37 | Chr4: 1306289-1306325 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4TE06680:transposon_fragment:1 | 1097 | Chr4: 1307227-1308323 | Arabidopsis thaliana |
AT4TE06685:transposon_fragment:1 | 37 | Chr4: 1306289-1306325 | Arabidopsis thaliana |