Genomics
Overlapping Features
Genome features that overlap coordinates of this TransposableElement
Exon: 1, Five Prime UTR: 1, Gene: 1, Intergenic Region: 1, mRNA: 1, Transposable Element: 1, Transposon Fragment: 1
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G02940:exon:1 | 904 | Chr4: 1306313-1307216 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G02940:five_prime_UTR:1 | 345 | Chr4: 1306313-1306657 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT4G02940 | locus:2139345 | AT4G02940 | 4726 | Chr4: 1306313-1311038 | A. thaliana | oxidoreductase, 2OG-Fe(II) oxygenase family protein;(source:Araport11) | ALKBH10B is a functional RNA N6-methyladenosine demethylase. Reduction in ALKBH10B decreases m6A levels, and affects the stability of flowering time genes including FT, SPL3 and SPL9. Mutant plants are early flowering. | oxidoreductase, 2OG-Fe(II) oxygenase family protein | ALKBH10B |
Intergenic Regions
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
intergenic_region_chrChr4_1299843..1306312 | 6470 | Chr4: 1299843-1306312 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4TE06680 | 3403 | Chr4: 1304921-1308323 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4TE06685:transposon_fragment:1 | 37 | Chr4: 1306289-1306325 | Arabidopsis thaliana |