Genomics
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G00840:CDS:8 | 117 | Chr4: 355483-355599 | Arabidopsis thaliana |
AT4G00840:CDS:7 | 66 | Chr4: 355678-355743 | Arabidopsis thaliana |
AT4G00840:CDS:6 | 86 | Chr4: 355831-355916 | Arabidopsis thaliana |
AT4G00840:CDS:4 | 127 | Chr4: 356031-356157 | Arabidopsis thaliana |
AT4G00840:CDS:3 | 92 | Chr4: 356265-356356 | Arabidopsis thaliana |
AT4G00840:CDS:2 | 199 | Chr4: 356452-356650 | Arabidopsis thaliana |
AT4G00840:CDS:1 | 189 | Chr4: 356917-357105 | Arabidopsis thaliana |
AT4G00840:CDS:5 | 62 | Chr4: 355875-355936 | Arabidopsis thaliana |
AT4G00840:CDS:4.1 | 127 | Chr4: 356031-356157 | Arabidopsis thaliana |
AT4G00840:CDS:3.1 | 92 | Chr4: 356265-356356 | Arabidopsis thaliana |
AT4G00840:CDS:2.1 | 199 | Chr4: 356452-356650 | Arabidopsis thaliana |
AT4G00840:CDS:1.1 | 189 | Chr4: 356917-357105 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G00830:exon:19 | 431 | Chr4: 354818-355248 | Arabidopsis thaliana |
AT4G00830:exon:18 | 418 | Chr4: 354818-355235 | Arabidopsis thaliana |
AT4G00830:exon:17 | 413 | Chr4: 354818-355230 | Arabidopsis thaliana |
AT4G00840:exon:6 | 86 | Chr4: 355831-355916 | Arabidopsis thaliana |
AT4G00840:exon:8 | 389 | Chr4: 355211-355599 | Arabidopsis thaliana |
AT4G00840:exon:7 | 66 | Chr4: 355678-355743 | Arabidopsis thaliana |
AT4G00840:exon:5 | 106 | Chr4: 355831-355936 | Arabidopsis thaliana |
AT4G00840:exon:4 | 127 | Chr4: 356031-356157 | Arabidopsis thaliana |
AT4G00840:exon:3 | 92 | Chr4: 356265-356356 | Arabidopsis thaliana |
AT4G00840:exon:2 | 199 | Chr4: 356452-356650 | Arabidopsis thaliana |
AT4G00840:exon:1 | 380 | Chr4: 356917-357296 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G00840:five_prime_UTR:1 | 191 | Chr4: 357106-357296 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT4G00830 | locus:2134638 | LIF2 | LHP1-Interacting Factor 2 | 3280 | Chr4: 351969-355248 | A. thaliana | RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) | Encodes a heterogeneous nuclear ribonucleoprotein (hnRNP-Q) that is involved in the plant innate immune response and may function as a suppressor of cell-autonomous immunity. | RNA-binding (RRM/RBD/RNP motifs) family protein | LIF2 |
AT4G00840 | locus:2134643 | AT4G00840 | 2086 | Chr4: 355211-357296 | A. thaliana | DHHC-type zinc finger family protein;(source:Araport11) | NULL | DHHC-type zinc finger family protein |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G00830.1 | 1999 | Chr4: 351969-355248 |
AT4G00830.2 | 2165 | Chr4: 351973-355235 |
AT4G00830.3 | 1952 | Chr4: 351974-355230 |
AT4G00830.4 | 2159 | Chr4: 351974-355230 |
AT4G00830.5 | 2121 | Chr4: 352016-355230 |
AT4G00830.6 | 1783 | Chr4: 352752-355230 |
AT4G00840.2 | 1359 | Chr4: 355211-357296 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G00830:three_prime_UTR:3 | 283 | Chr4: 354966-355248 | Arabidopsis thaliana |
AT4G00830:three_prime_UTR:2 | 270 | Chr4: 354966-355235 | Arabidopsis thaliana |
AT4G00830:three_prime_UTR:1 | 265 | Chr4: 354966-355230 | Arabidopsis thaliana |
AT4G00840:three_prime_UTR:4 | 272 | Chr4: 355211-355482 | Arabidopsis thaliana |
AT4G00840:three_prime_UTR:3 | 389 | Chr4: 355211-355599 | Arabidopsis thaliana |
AT4G00840:three_prime_UTR:2 | 66 | Chr4: 355678-355743 | Arabidopsis thaliana |
AT4G00840:three_prime_UTR:1 | 44 | Chr4: 355831-355874 | Arabidopsis thaliana |