Genomics
Overlapping Features
Genome features that overlap coordinates of this Exon
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G55520:CDS:5 | 157 | Chr3: 20594972-20595128 | Arabidopsis thaliana |
AT3G55520:CDS:5.1 | 157 | Chr3: 20594972-20595128 | Arabidopsis thaliana |
AT3G55520:CDS:5.2 | 157 | Chr3: 20594972-20595128 | Arabidopsis thaliana |
AT3G55530:CDS:8 | 126 | Chr3: 20595300-20595425 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G55520:exon:8 | 157 | Chr3: 20594972-20595128 | Arabidopsis thaliana |
AT3G55530:exon:9 | 300 | Chr3: 20595126-20595425 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT3G55520 | locus:2100016 | AT3G55520 | 1685 | Chr3: 20593661-20595345 | A. thaliana | FKBP-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11) | NULL | FKBP-like peptidyl-prolyl cis-trans isomerase family protein | ||
AT3G55530 | locus:2100021 | SDIR1 | SALT- AND DROUGHT-INDUCED RING FINGER1 | 2478 | Chr3: 20595126-20597603 | A. thaliana | RING/U-box superfamily protein;(source:Araport11) | Encodes an intracellular membrane localized protein with E3 ligase activity, found in the ER with the C-terminus facing the cytoplasm. It is involved in regulation of ABA signaling. Loss of function alleles show decreased sensitivity to ABA. Overexpression results in increased sensitivity to ABA. | RING/U-box superfamily protein | AtSDIR1, SDIR1 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G55520.3 | 993 | Chr3: 20593661-20595128 |
AT3G55520.2 | 1004 | Chr3: 20593661-20595128 |
AT3G55520.1 | 1017 | Chr3: 20593661-20595345 |
AT3G55530.1 | 1164 | Chr3: 20595126-20597603 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G55520:three_prime_UTR:1 | 217 | Chr3: 20595129-20595345 | Arabidopsis thaliana |
AT3G55530:three_prime_UTR:1 | 174 | Chr3: 20595126-20595299 | Arabidopsis thaliana |