Genomics
Overlapping Features
Genome features that overlap coordinates of this Exon
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G54780:CDS:3 | 876 | Chr3: 20279615-20280490 | Arabidopsis thaliana |
AT3G54780:CDS:6 | 810 | Chr3: 20280620-20281429 | Arabidopsis thaliana |
AT3G54780:CDS:4 | 873 | Chr3: 20279618-20280490 | Arabidopsis thaliana |
AT3G54780:CDS:6.1 | 810 | Chr3: 20280620-20281429 | Arabidopsis thaliana |
AT3G54780:CDS:3.1 | 876 | Chr3: 20279615-20280490 | Arabidopsis thaliana |
AT3G54780:CDS:6.2 | 810 | Chr3: 20280620-20281429 | Arabidopsis thaliana |
AT3G54780:CDS:4.1 | 873 | Chr3: 20279618-20280490 | Arabidopsis thaliana |
AT3G54780:CDS:6.3 | 810 | Chr3: 20280620-20281429 | Arabidopsis thaliana |
AT3G54780:CDS:5 | 1812 | Chr3: 20279618-20281429 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G54780:exon:9 | 810 | Chr3: 20280620-20281429 | Arabidopsis thaliana |
AT3G54780:exon:6 | 876 | Chr3: 20279615-20280490 | Arabidopsis thaliana |
AT3G54780:exon:7 | 873 | Chr3: 20279618-20280490 | Arabidopsis thaliana |
AT3G54780:exon:10 | 925 | Chr3: 20280620-20281544 | Arabidopsis thaliana |
AT3G54790:exon:9 | 361 | Chr3: 20281535-20281895 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT3G54780 | locus:2102445 | AT3G54780 | 2754 | Chr3: 20278798-20281551 | A. thaliana | Zinc finger (C3HC4-type RING finger) family protein;(source:Araport11) | NULL | Zinc finger (C3HC4-type RING finger) family protein | ||
AT3G54790 | locus:2102455 | AT3G54790 | 3756 | Chr3: 20281535-20285290 | A. thaliana | ARM repeat superfamily protein;(source:Araport11) | NULL | ARM repeat superfamily protein | PUB3 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G54780.4 | 2089 | Chr3: 20278798-20281429 |
AT3G54780.5 | 2050 | Chr3: 20278834-20281429 |
AT3G54780.3 | 2163 | Chr3: 20278839-20281544 |
AT3G54780.2 | 2110 | Chr3: 20278889-20281544 |
AT3G54780.1 | 2181 | Chr3: 20278954-20281551 |
AT3G54790.2 | 2735 | Chr3: 20281535-20285126 |
AT3G54790.1 | 2946 | Chr3: 20281535-20285290 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G54780:three_prime_UTR:1 | 115 | Chr3: 20281430-20281544 | Arabidopsis thaliana |
AT3G54780:three_prime_UTR:2 | 122 | Chr3: 20281430-20281551 | Arabidopsis thaliana |
AT3G54790:three_prime_UTR:1 | 295 | Chr3: 20281535-20281829 | Arabidopsis thaliana |