help  | faq  | software  | BAR
Hide

Oops!

Error: 403
Hide

Oops!

https://bar.utoronto.ca/thalemine/service/ is incorrect

Gene : JR1 A. thaliana

DB identifier  ? AT3G16470 Secondary Identifier  ? locus:2088299
Name  ? JASMONATE RESPONSIVE 1 Brief Description  Mannose-binding lectin superfamily protein
TAIR Computational Description  Mannose-binding lectin superfamily protein;(source:Araport11)
TAIR Curator Summary  Encodes a JA-responsive gene that coordinates with GRP7 in shaping plant development through the regulation of RNA processing in Arabidopsis. AtJAC1 interacts with RNA binding protein GRP7 specifically in the cytoplasm to regulate its nucleocytoplasmic distribution.
TAIR Short Description  Mannose-binding lectin superfamily protein
TAIR Aliases  AtJAC1, JAL35, JR1

2 Gene Rifs

1 Organism

39 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3943  
Location: Chr3:5595282-5599224 reverse strand

Gene models - JR1 AT3G16470

? Gene models

Transcripts: 4  Exons: 21  Introns: 17 

Overlapping Features

? Genome features that overlap coordinates of this Gene

16 Child Features

1 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
A0A1I9LQM9_ARATH A0A654F7T7_ARATH JAL35_ARATH JAL35_ARATH-2 similarity Belongs to the jacalin lectin family.

4 Proteins

Function

Gene Ontology

cellular component
plant-type vacuole  ? ECO  
plasmodesma  ? ECO  
cytosol  ? ECO  
chloroplast  ? ECO  
nucleus  ? ECO  
molecular function
carbohydrate binding  ? ECO  
biological process
response to jasmonic acid  ? ECO  
vegetative to reproductive phase transition of meristem  ? ECO  
response to wounding  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets