Genomics
Overlapping Features
Genome features that overlap coordinates of this Exon
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G16460:CDS:5 | 249 | Chr3: 5595274-5595522 | Arabidopsis thaliana |
AT3G16460:CDS:5.1 | 249 | Chr3: 5595274-5595522 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G16460:exon:8 | 639 | Chr3: 5595274-5595912 | Arabidopsis thaliana |
AT3G16470:exon:12 | 1063 | Chr3: 5595282-5596344 | Arabidopsis thaliana |
AT3G16470:exon:11 | 664 | Chr3: 5595681-5596344 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT3G16460 | locus:2088374 | JAL34 | jacalin-related lectin 34 | 3422 | Chr3: 5592491-5595912 | A. thaliana | Mannose-binding lectin superfamily protein;(source:Araport11) | Mannose-binding protein | Mannose-binding lectin superfamily protein | JAL34 |
AT3G16470 | locus:2088299 | JR1 | JASMONATE RESPONSIVE 1 | 3943 | Chr3: 5595282-5599224 | A. thaliana | Mannose-binding lectin superfamily protein;(source:Araport11) | Encodes a JA-responsive gene that coordinates with GRP7 in shaping plant development through the regulation of RNA processing in Arabidopsis. AtJAC1 interacts with RNA binding protein GRP7 specifically in the cytoplasm to regulate its nucleocytoplasmic distribution. | Mannose-binding lectin superfamily protein | AtJAC1, JAL35, JR1 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G16460.1 | 2708 | Chr3: 5592491-5595912 |
AT3G16460.2 | 2698 | Chr3: 5592644-5595717 |
AT3G16470.3 | 2169 | Chr3: 5595282-5599224 |
AT3G16470.1 | 1836 | Chr3: 5595681-5598044 |
AT3G16470.4 | 1770 | Chr3: 5595681-5599224 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G16460:three_prime_UTR:2 | 390 | Chr3: 5595523-5595912 | Arabidopsis thaliana |
AT3G16460:three_prime_UTR:1 | 195 | Chr3: 5595523-5595717 | Arabidopsis thaliana |
AT3G16470:three_prime_UTR:3 | 814 | Chr3: 5595282-5596095 | Arabidopsis thaliana |
AT3G16470:three_prime_UTR:2 | 415 | Chr3: 5595681-5596095 | Arabidopsis thaliana |