Genomics
Gene models -
Gene models
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Overlapping Features
Genome features that overlap coordinates of this CDS
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G11240:CDS:8 | 117 | Chr3: 3518665-3518781 | Arabidopsis thaliana |
AT3G11240:CDS:8.2 | 117 | Chr3: 3518665-3518781 | Arabidopsis thaliana |
AT3G11240:CDS:8.3 | 117 | Chr3: 3518665-3518781 | Arabidopsis thaliana |
AT3G11240:CDS:8.4 | 117 | Chr3: 3518665-3518781 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G11240:exon:12 | 310 | Chr3: 3518472-3518781 | Arabidopsis thaliana |
AT3G11240:exon:11 | 299 | Chr3: 3518483-3518781 | Arabidopsis thaliana |
AT3G11240:exon:10 | 298 | Chr3: 3518484-3518781 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT3G11240 | locus:2074718 | ATE2 | arginine-tRNA protein transferase 2 | 2717 | Chr3: 3518472-3521188 | A. thaliana | arginine-tRNA protein transferase 2;(source:Araport11) | Encodes an arginyl-tRNA:protein arginyltransferase (ATE2), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. Another component of the N-end rule pathway is At5g02310/PROTEOLYSIS6 (PRT6). PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination. ATE2 has also been show to be involved in the response to pathogens. | arginine-tRNA protein transferase 2 | ATATE2, ATE2 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G11240.2 | 2314 | Chr3: 3518472-3521130 |
AT3G11240.1 | 2096 | Chr3: 3518483-3521188 |
AT3G11240.3 | 2235 | Chr3: 3518483-3521188 |
AT3G11240.4 | 2222 | Chr3: 3518483-3521188 |
AT3G11240.5 | 1697 | Chr3: 3518484-3520352 |