Genomics
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G08840:CDS:16 | 246 | Chr3: 2682611-2682856 | Arabidopsis thaliana |
AT3G08840:CDS:13 | 48 | Chr3: 2683233-2683280 | Arabidopsis thaliana |
AT3G08840:CDS:11 | 210 | Chr3: 2683388-2683597 | Arabidopsis thaliana |
AT3G08840:CDS:10 | 84 | Chr3: 2683819-2683902 | Arabidopsis thaliana |
AT3G08840:CDS:9 | 120 | Chr3: 2684248-2684367 | Arabidopsis thaliana |
AT3G08840:CDS:8 | 93 | Chr3: 2684526-2684618 | Arabidopsis thaliana |
AT3G08840:CDS:7 | 78 | Chr3: 2684725-2684802 | Arabidopsis thaliana |
AT3G08840:CDS:6 | 63 | Chr3: 2684945-2685007 | Arabidopsis thaliana |
AT3G08840:CDS:5 | 72 | Chr3: 2685148-2685219 | Arabidopsis thaliana |
AT3G08840:CDS:4 | 112 | Chr3: 2685315-2685426 | Arabidopsis thaliana |
AT3G08840:CDS:3 | 44 | Chr3: 2685520-2685563 | Arabidopsis thaliana |
AT3G08840:CDS:2 | 72 | Chr3: 2685653-2685724 | Arabidopsis thaliana |
AT3G08840:CDS:1 | 318 | Chr3: 2685840-2686157 | Arabidopsis thaliana |
AT3G08840:CDS:17 | 92 | Chr3: 2682387-2682478 | Arabidopsis thaliana |
AT3G08840:CDS:15 | 237 | Chr3: 2682620-2682856 | Arabidopsis thaliana |
AT3G08840:CDS:13.1 | 48 | Chr3: 2683233-2683280 | Arabidopsis thaliana |
AT3G08840:CDS:11.1 | 210 | Chr3: 2683388-2683597 | Arabidopsis thaliana |
AT3G08840:CDS:10.1 | 84 | Chr3: 2683819-2683902 | Arabidopsis thaliana |
AT3G08840:CDS:9.1 | 120 | Chr3: 2684248-2684367 | Arabidopsis thaliana |
AT3G08840:CDS:8.1 | 93 | Chr3: 2684526-2684618 | Arabidopsis thaliana |
AT3G08840:CDS:7.1 | 78 | Chr3: 2684725-2684802 | Arabidopsis thaliana |
AT3G08840:CDS:6.1 | 63 | Chr3: 2684945-2685007 | Arabidopsis thaliana |
AT3G08840:CDS:5.1 | 72 | Chr3: 2685148-2685219 | Arabidopsis thaliana |
AT3G08840:CDS:4.1 | 112 | Chr3: 2685315-2685426 | Arabidopsis thaliana |
AT3G08840:CDS:3.1 | 44 | Chr3: 2685520-2685563 | Arabidopsis thaliana |
AT3G08840:CDS:2.1 | 72 | Chr3: 2685653-2685724 | Arabidopsis thaliana |
AT3G08840:CDS:1.1 | 318 | Chr3: 2685840-2686157 | Arabidopsis thaliana |
AT3G08840:CDS:17.1 | 92 | Chr3: 2682387-2682478 | Arabidopsis thaliana |
AT3G08840:CDS:15.1 | 237 | Chr3: 2682620-2682856 | Arabidopsis thaliana |
AT3G08840:CDS:13.2 | 48 | Chr3: 2683233-2683280 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G08840:exon:23 | 908 | Chr3: 2681949-2682856 | Arabidopsis thaliana |
AT3G08840:exon:3 | 413 | Chr3: 2685840-2686252 | Arabidopsis thaliana |
AT3G08840:exon:1 | 457 | Chr3: 2685840-2686296 | Arabidopsis thaliana |
AT3G08840:exon:22 | 92 | Chr3: 2682387-2682478 | Arabidopsis thaliana |
AT3G08840:exon:19 | 237 | Chr3: 2682620-2682856 | Arabidopsis thaliana |
AT3G08840:exon:6 | 348 | Chr3: 2685840-2686187 | Arabidopsis thaliana |
AT3G08840:exon:21 | 470 | Chr3: 2682387-2682856 | Arabidopsis thaliana |
AT3G08840:exon:17 | 48 | Chr3: 2683233-2683280 | Arabidopsis thaliana |
AT3G08840:exon:2 | 441 | Chr3: 2685840-2686280 | Arabidopsis thaliana |
AT3G08840:exon:20 | 1145 | Chr3: 2682453-2683597 | Arabidopsis thaliana |
AT3G08840:exon:4 | 408 | Chr3: 2685840-2686247 | Arabidopsis thaliana |
AT3G08840:exon:18 | 236 | Chr3: 2683045-2683280 | Arabidopsis thaliana |
AT3G08840:exon:16 | 210 | Chr3: 2683388-2683597 | Arabidopsis thaliana |
AT3G08840:exon:15 | 84 | Chr3: 2683819-2683902 | Arabidopsis thaliana |
AT3G08840:exon:14 | 120 | Chr3: 2684248-2684367 | Arabidopsis thaliana |
AT3G08840:exon:13 | 93 | Chr3: 2684526-2684618 | Arabidopsis thaliana |
AT3G08840:exon:12 | 78 | Chr3: 2684725-2684802 | Arabidopsis thaliana |
AT3G08840:exon:11 | 63 | Chr3: 2684945-2685007 | Arabidopsis thaliana |
AT3G08840:exon:10 | 72 | Chr3: 2685148-2685219 | Arabidopsis thaliana |
AT3G08840:exon:9 | 112 | Chr3: 2685315-2685426 | Arabidopsis thaliana |
AT3G08840:exon:8 | 44 | Chr3: 2685520-2685563 | Arabidopsis thaliana |
AT3G08840:exon:7 | 72 | Chr3: 2685653-2685724 | Arabidopsis thaliana |
AT3G08840:exon:5 | 394 | Chr3: 2685840-2686233 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G08840:five_prime_UTR:3 | 95 | Chr3: 2686158-2686252 | Arabidopsis thaliana |
AT3G08840:five_prime_UTR:1 | 139 | Chr3: 2686158-2686296 | Arabidopsis thaliana |
AT3G08840:five_prime_UTR:6 | 30 | Chr3: 2686158-2686187 | Arabidopsis thaliana |
AT3G08840:five_prime_UTR:2 | 123 | Chr3: 2686158-2686280 | Arabidopsis thaliana |
AT3G08840:five_prime_UTR:4 | 90 | Chr3: 2686158-2686247 | Arabidopsis thaliana |
AT3G08840:five_prime_UTR:5 | 76 | Chr3: 2686158-2686233 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT3G08840 | locus:2097648 | AT3G08840 | 6862 | Chr3: 2679435-2686296 | A. thaliana | D-alanine-D-alanine ligase family;(source:Araport11) | NULL | D-alanine--D-alanine ligase family |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G08840.1 | 3456 | Chr3: 2679435-2686252 |
AT3G08840.2 | 3156 | Chr3: 2679445-2686296 |
AT3G08840.3 | 3151 | Chr3: 2679461-2686280 |
AT3G08840.4 | 3265 | Chr3: 2679461-2686280 |
AT3G08840.5 | 3550 | Chr3: 2679488-2686280 |
AT3G08840.7 | 3261 | Chr3: 2679488-2686280 |
AT3G08840.8 | 3051 | Chr3: 2679488-2686280 |
AT3G08840.6 | 3476 | Chr3: 2679488-2686280 |
AT3G08840.9 | 3373 | Chr3: 2679517-2686233 |
AT3G08840.10 | 2975 | Chr3: 2679708-2686187 |
AT3G08840.12 | 2291 | Chr3: 2682453-2686247 |
AT3G08840.13 | 1578 | Chr3: 2683045-2686233 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G08840:three_prime_UTR:4 | 662 | Chr3: 2681949-2682610 | Arabidopsis thaliana |
AT3G08840:three_prime_UTR:3 | 224 | Chr3: 2682387-2682610 | Arabidopsis thaliana |
AT3G08840:three_prime_UTR:2 | 866 | Chr3: 2682453-2683318 | Arabidopsis thaliana |
AT3G08840:three_prime_UTR:1 | 152 | Chr3: 2683045-2683196 | Arabidopsis thaliana |