Genomics
Transcript | Exons | Introns | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
HIR2
AT3G01290.1
1663 |
|
|
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G01290:CDS:4 | 359 | Chr3: 88252-88610 | Arabidopsis thaliana |
AT3G01290:CDS:3 | 189 | Chr3: 88693-88881 | Arabidopsis thaliana |
AT3G01290:CDS:2 | 121 | Chr3: 88970-89090 | Arabidopsis thaliana |
AT3G01290:CDS:1 | 189 | Chr3: 89168-89356 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G01280:exon:6 | 765 | Chr3: 87306-88070 | Arabidopsis thaliana |
AT3G01290:exon:4 | 927 | Chr3: 87684-88610 | Arabidopsis thaliana |
AT3G01290:exon:3 | 189 | Chr3: 88693-88881 | Arabidopsis thaliana |
AT3G01290:exon:2 | 121 | Chr3: 88970-89090 | Arabidopsis thaliana |
AT3G01290:exon:1 | 426 | Chr3: 89168-89593 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G01290:five_prime_UTR:1 | 237 | Chr3: 89357-89593 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT3G01280 | locus:2100252 | VDAC1 | voltage dependent anion channel 1 | 2520 | Chr3: 85551-88070 | A. thaliana | voltage dependent anion channel 1;(source:Araport11) | Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1, AT5G67500/VDAC2, AT5G15090/VDAC3, AT5G57490/VDAC4, AT5G15090/VDAC5). VDACs are reported to be porin-type, beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol. The mRNA is cell-to-cell mobile. | voltage dependent anion channel 1 | ATVDAC1, VDAC1 |
AT3G01290 | locus:2100242 | HIR2 | hypersensitive induced reaction 2 | 1910 | Chr3: 87684-89593 | A. thaliana | SPFH/Band 7/PHB domain-containing membrane-associated protein family;(source:Araport11) | Hypersensitive response induced stomatin/prohibitin/flotillin/HflK/C (SPFH) domain containing protein that interacts with RPS2. | SPFH/Band 7/PHB domain-containing membrane-associated protein family | AtHIR2, HIR2 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G01280:three_prime_UTR:1 | 458 | Chr3: 87613-88070 | Arabidopsis thaliana |
AT3G01290:three_prime_UTR:1 | 568 | Chr3: 87684-88251 | Arabidopsis thaliana |