Genomics
Transcript | Exons | Introns | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
AT1G55030.1
AT1G55030.1
1269 |
|
|
||||||||||
AT1G55030.2
AT1G55030.2
1558 |
|
|
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs: 5, Exons: 5, Five Prime UTR: 1, Genes: 2, mRNAs: 2, Three Prime UTR: 1, Transposable Element: 1, Transposon Fragment: 1
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G55030:CDS:4 | 282 | Chr1: 20530417-20530698 | Arabidopsis thaliana |
AT1G55030:CDS:3 | 987 | Chr1: 20530782-20531768 | Arabidopsis thaliana |
AT1G55030:CDS:4.1 | 282 | Chr1: 20530417-20530698 | Arabidopsis thaliana |
AT1G55030:CDS:2 | 1006 | Chr1: 20530782-20531787 | Arabidopsis thaliana |
AT1G55030:CDS:1 | 11 | Chr1: 20531882-20531892 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G55020:exon:8 | 1079 | Chr1: 20529390-20530468 | Arabidopsis thaliana |
AT1G55030:exon:3 | 987 | Chr1: 20530782-20531768 | Arabidopsis thaliana |
AT1G55030:exon:4 | 282 | Chr1: 20530417-20530698 | Arabidopsis thaliana |
AT1G55030:exon:2 | 1006 | Chr1: 20530782-20531787 | Arabidopsis thaliana |
AT1G55030:exon:1 | 270 | Chr1: 20531882-20532151 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G55030:five_prime_UTR:1 | 259 | Chr1: 20531893-20532151 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G55020 | locus:2011030 | LOX1 | lipoxygenase 1 | 4815 | Chr1: 20525654-20530468 | A. thaliana | lipoxygenase 1;(source:Araport11) | lipoxygenase, a defense gene conferring resistance Xanthomonas campestris The mRNA is cell-to-cell mobile. | lipoxygenase 1 | ATLOX1, LOX1 |
AT1G55030 | locus:2010950 | AT1G55030 | 1735 | Chr1: 20530417-20532151 | A. thaliana | RNI-like superfamily protein;(source:Araport11) | NULL | RNI-like superfamily protein |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G55020.1 | 3049 | Chr1: 20525654-20530468 |
AT1G55030.1 | 1269 | Chr1: 20530417-20531768 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G55020:three_prime_UTR:1 | 325 | Chr1: 20530144-20530468 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1TE67830 | 378 | Chr1: 20532132-20532509 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1TE67830:transposon_fragment:1 | 378 | Chr1: 20532132-20532509 | Arabidopsis thaliana |