Genomics
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs: 10, Exons: 9, Five Prime UTR: 1, Genes: 2, mRNAs: 2, Three Prime UTR: 1, Transposable Element: 1, Transposon Fragment: 1
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G55020:CDS:1 | 199 | Chr1: 20525798-20525996 | Arabidopsis thaliana |
AT1G55020:CDS:2 | 290 | Chr1: 20527241-20527530 | Arabidopsis thaliana |
AT1G55020:CDS:3 | 574 | Chr1: 20527629-20528202 | Arabidopsis thaliana |
AT1G55020:CDS:4 | 86 | Chr1: 20528286-20528371 | Arabidopsis thaliana |
AT1G55020:CDS:5 | 108 | Chr1: 20528460-20528567 | Arabidopsis thaliana |
AT1G55020:CDS:6 | 302 | Chr1: 20528643-20528944 | Arabidopsis thaliana |
AT1G55020:CDS:7 | 267 | Chr1: 20529026-20529292 | Arabidopsis thaliana |
AT1G55020:CDS:8 | 754 | Chr1: 20529390-20530143 | Arabidopsis thaliana |
AT1G55030:CDS:4 | 282 | Chr1: 20530417-20530698 | Arabidopsis thaliana |
AT1G55030:CDS:4.1 | 282 | Chr1: 20530417-20530698 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G55020:exon:1 | 343 | Chr1: 20525654-20525996 | Arabidopsis thaliana |
AT1G55020:exon:2 | 290 | Chr1: 20527241-20527530 | Arabidopsis thaliana |
AT1G55020:exon:3 | 574 | Chr1: 20527629-20528202 | Arabidopsis thaliana |
AT1G55020:exon:4 | 86 | Chr1: 20528286-20528371 | Arabidopsis thaliana |
AT1G55020:exon:5 | 108 | Chr1: 20528460-20528567 | Arabidopsis thaliana |
AT1G55020:exon:6 | 302 | Chr1: 20528643-20528944 | Arabidopsis thaliana |
AT1G55020:exon:7 | 267 | Chr1: 20529026-20529292 | Arabidopsis thaliana |
AT1G55020:exon:8 | 1079 | Chr1: 20529390-20530468 | Arabidopsis thaliana |
AT1G55030:exon:4 | 282 | Chr1: 20530417-20530698 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G55020:five_prime_UTR:1 | 144 | Chr1: 20525654-20525797 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G55020 | locus:2011030 | LOX1 | lipoxygenase 1 | 4815 | Chr1: 20525654-20530468 | A. thaliana | lipoxygenase 1;(source:Araport11) | lipoxygenase, a defense gene conferring resistance Xanthomonas campestris The mRNA is cell-to-cell mobile. | lipoxygenase 1 | ATLOX1, LOX1 |
AT1G55030 | locus:2010950 | AT1G55030 | 1735 | Chr1: 20530417-20532151 | A. thaliana | RNI-like superfamily protein;(source:Araport11) | NULL | RNI-like superfamily protein |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G55030.1 | 1269 | Chr1: 20530417-20531768 |
AT1G55030.2 | 1558 | Chr1: 20530417-20532151 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G55020:three_prime_UTR:1 | 325 | Chr1: 20530144-20530468 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1TE67820 | 357 | Chr1: 20526473-20526829 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1TE67820:transposon_fragment:1 | 357 | Chr1: 20526473-20526829 | Arabidopsis thaliana |