Genomics
Transcript | Exons | Introns | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
STP1
AT1G11260.1
2483 |
|
|
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs: 4, Exons: 6, Five Prime UTR: 1, Genes: 2, mRNAs: 2, Three Prime UTRs: 3, Transposable Element: 1, Transposon Fragment: 1
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G11260:CDS:1 | 133 | Chr1: 3777460-3777592 | Arabidopsis thaliana |
AT1G11260:CDS:2 | 323 | Chr1: 3777900-3778222 | Arabidopsis thaliana |
AT1G11260:CDS:3 | 630 | Chr1: 3778929-3779558 | Arabidopsis thaliana |
AT1G11260:CDS:4 | 483 | Chr1: 3779651-3780133 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G11260:exon:1 | 357 | Chr1: 3777236-3777592 | Arabidopsis thaliana |
AT1G11260:exon:2 | 323 | Chr1: 3777900-3778222 | Arabidopsis thaliana |
AT1G11260:exon:3 | 630 | Chr1: 3778929-3779558 | Arabidopsis thaliana |
AT1G11260:exon:4 | 1173 | Chr1: 3779651-3780823 | Arabidopsis thaliana |
AT1G11270:exon:9 | 312 | Chr1: 3780386-3780697 | Arabidopsis thaliana |
AT1G11270:exon:8 | 252 | Chr1: 3780446-3780697 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G11260:five_prime_UTR:1 | 224 | Chr1: 3777236-3777459 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G11260 | locus:2202044 | STP1 | sugar transporter 1 | 3588 | Chr1: 3777236-3780823 | A. thaliana | sugar transporter 1;(source:Araport11) | Encodes a H+/hexose cotransporter. The mRNA is cell-to-cell mobile. | sugar transporter 1 | ATSTP1, STP1 |
AT1G11270 | locus:2202099 | AT1G11270 | 6714 | Chr1: 3780386-3787099 | A. thaliana | F-box and associated interaction domains-containing protein;(source:Araport11) | NULL | F-box and associated interaction domains-containing protein |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G11270.2 | 1522 | Chr1: 3780386-3787029 |
AT1G11270.3 | 1272 | Chr1: 3780446-3786988 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G11260:three_prime_UTR:1 | 690 | Chr1: 3780134-3780823 | Arabidopsis thaliana |
AT1G11270:three_prime_UTR:5 | 312 | Chr1: 3780386-3780697 | Arabidopsis thaliana |
AT1G11270:three_prime_UTR:4 | 252 | Chr1: 3780446-3780697 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1TE12295 | 4957 | Chr1: 3780765-3785721 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1TE12295:transposon_fragment:1 | 4957 | Chr1: 3780765-3785721 | Arabidopsis thaliana |