Genomics
Overlapping Features
Genome features that overlap coordinates of this Exon
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G08620:CDS:12 | 312 | Chr1: 2743059-2743370 | Arabidopsis thaliana |
AT1G08620:CDS:12.1 | 312 | Chr1: 2743059-2743370 | Arabidopsis thaliana |
AT1G08620:CDS:12.2 | 312 | Chr1: 2743059-2743370 | Arabidopsis thaliana |
AT1G08620:CDS:12.3 | 312 | Chr1: 2743059-2743370 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G08620:exon:18 | 709 | Chr1: 2743059-2743767 | Arabidopsis thaliana |
AT1G08620:exon:19 | 823 | Chr1: 2743059-2743881 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G08620 | locus:2025635 | PKDM7D | 7226 | Chr1: 2736656-2743881 | A. thaliana | Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein;(source:Araport11) | Member of family of Jumonji C (JmjC)-containing demethylases, its catalytic domain exhibits both H3K4 and H3K9 demethylation activities. Together with MMD1 promotes in male meiocytes gene expression in an H3K9me3-dependent manner and thereby contributes to meiotic chromosome condensation. | Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein | JMJ16, PKDM7D |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G08620.2 | 4422 | Chr1: 2736656-2743881 |
AT1G08620.3 | 4483 | Chr1: 2736836-2743724 |
AT1G08620.4 | 4531 | Chr1: 2736854-2743767 |
AT1G08620.1 | 4426 | Chr1: 2736854-2743881 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G08620:three_prime_UTR:1 | 354 | Chr1: 2743371-2743724 | Arabidopsis thaliana |
AT1G08620:three_prime_UTR:2 | 397 | Chr1: 2743371-2743767 | Arabidopsis thaliana |
AT1G08620:three_prime_UTR:3 | 511 | Chr1: 2743371-2743881 | Arabidopsis thaliana |