Genomics
Genome feature
| Region: |
mRNA
|
Length: |
1430
 |
| Location: | Chr1:1718555-1720587 | ||
| Transcript | Exons | Introns | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
AT1G05730.1
AT1G05730.1
1430 |
|
|
||||||||||
|
AT1G05730.2
AT1G05730.2
678 |
|
|
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT1G05720:CDS:1 |
178
|
Chr1: 1718672-1718849 | Arabidopsis thaliana |
| AT1G05730:CDS:1 |
129
|
Chr1: 1719107-1719235 | Arabidopsis thaliana |
| AT1G05730:CDS:3 |
138
|
Chr1: 1719760-1719897 | Arabidopsis thaliana |
| AT1G05730:CDS:4 |
183
|
Chr1: 1719977-1720159 | Arabidopsis thaliana |
| AT1G05730:CDS:2 |
171
|
Chr1: 1719727-1719897 | Arabidopsis thaliana |
| AT1G05730:CDS:4.1 |
183
|
Chr1: 1719977-1720159 | Arabidopsis thaliana |
Exons
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT1G05720:exon:1 |
238
|
Chr1: 1718672-1718909 | Arabidopsis thaliana |
| AT1G05730:exon:1 |
681
|
Chr1: 1718555-1719235 | Arabidopsis thaliana |
| AT1G05730:exon:3 |
138
|
Chr1: 1719760-1719897 | Arabidopsis thaliana |
| AT1G05730:exon:5 |
611
|
Chr1: 1719977-1720587 | Arabidopsis thaliana |
| AT1G05730:exon:2 |
171
|
Chr1: 1719727-1719897 | Arabidopsis thaliana |
| AT1G05730:exon:4 |
507
|
Chr1: 1719977-1720483 | Arabidopsis thaliana |
| AT1G04417:exon:1 |
360
|
Chr1: 1719300-1719659 | Arabidopsis thaliana |
Five Prime UTRs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT1G05720:five_prime_UTR:1 |
60
|
Chr1: 1718850-1718909 | Arabidopsis thaliana |
| AT1G05730:five_prime_UTR:1 |
552
|
Chr1: 1718555-1719106 | Arabidopsis thaliana |
Genes
| DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
|---|---|---|---|---|---|---|---|---|---|---|
| AT1G05720 | locus:2031928 | AT1G05720 |
1521
|
Chr1: 1717389-1718909 | A. thaliana | selenoprotein family protein;(source:Araport11) | NULL | selenoprotein family protein | ||
| AT1G05730 | locus:2031943 | AT1G05730 |
2033
|
Chr1: 1718555-1720587 | A. thaliana | FAM136A-like protein (DUF842);(source:Araport11) | NULL | Eukaryotic protein of unknown function (DUF842) | ||
| AT1G04417 | AT1G04417 |
360
|
Chr1: 1719300-1719659 | A. thaliana | Natural antisense transcript overlaps with AT1G05730;(source:Araport11) | NULL |
mRNAs
| DB identifier | Length | Chromosome Location |
|---|---|---|
| AT1G05720.1 |
840
|
Chr1: 1717389-1718909 |
| AT1G05730.2 |
678
|
Chr1: 1719727-1720483 |
Three Prime UTRs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT1G05730:three_prime_UTR:2 |
428
|
Chr1: 1720160-1720587 | Arabidopsis thaliana |
| AT1G05730:three_prime_UTR:1 |
324
|
Chr1: 1720160-1720483 | Arabidopsis thaliana |
