Genomics
Genome feature
| Region: |
mRNA
|
Length: |
840
 |
| Location: | Chr1:1717389-1718909 reverse strand | ||
| Transcript | Exons | Introns | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
AT1G05720.1
AT1G05720.1
840 |
|
|
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT1G05720:CDS:4 |
73
|
Chr1: 1717677-1717749 | Arabidopsis thaliana |
| AT1G05720:CDS:3 |
182
|
Chr1: 1718120-1718301 | Arabidopsis thaliana |
| AT1G05720:CDS:2 |
59
|
Chr1: 1718430-1718488 | Arabidopsis thaliana |
| AT1G05720:CDS:1 |
178
|
Chr1: 1718672-1718849 | Arabidopsis thaliana |
Exons
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT1G05720:exon:4 |
361
|
Chr1: 1717389-1717749 | Arabidopsis thaliana |
| AT1G05720:exon:3 |
182
|
Chr1: 1718120-1718301 | Arabidopsis thaliana |
| AT1G05720:exon:2 |
59
|
Chr1: 1718430-1718488 | Arabidopsis thaliana |
| AT1G05720:exon:1 |
238
|
Chr1: 1718672-1718909 | Arabidopsis thaliana |
| AT1G04413:exon:1 |
360
|
Chr1: 1717730-1718089 | Arabidopsis thaliana |
| AT1G05730:exon:1 |
681
|
Chr1: 1718555-1719235 | Arabidopsis thaliana |
Five Prime UTRs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT1G05720:five_prime_UTR:1 |
60
|
Chr1: 1718850-1718909 | Arabidopsis thaliana |
| AT1G05730:five_prime_UTR:1 |
552
|
Chr1: 1718555-1719106 | Arabidopsis thaliana |
Genes
| DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
|---|---|---|---|---|---|---|---|---|---|---|
| AT1G05720 | locus:2031928 | AT1G05720 |
1521
|
Chr1: 1717389-1718909 | A. thaliana | selenoprotein family protein;(source:Araport11) | NULL | selenoprotein family protein | ||
| AT1G04413 | AT1G04413 |
360
|
Chr1: 1717730-1718089 | A. thaliana | Natural antisense transcript overlaps with AT1G05720;(source:Araport11) | NULL | ||||
| AT1G05730 | locus:2031943 | AT1G05730 |
2033
|
Chr1: 1718555-1720587 | A. thaliana | FAM136A-like protein (DUF842);(source:Araport11) | NULL | Eukaryotic protein of unknown function (DUF842) |
Three Prime UTRs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT1G05720:three_prime_UTR:1 |
288
|
Chr1: 1717389-1717676 | Arabidopsis thaliana |
