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Gene : AtCDC48C A. thaliana

DB identifier  ? AT5G03340 Secondary Identifier  ? locus:2831844
Name  ? cell division cycle 48C Brief Description  ATPase, AAA-type, CDC48 protein
TAIR Computational Description  ATPase, AAA-type, CDC48 protein;(source:Araport11)
TAIR Curator Summary  NULL
TAIR Short Description  ATPase, AAA-type, CDC48 protein
TAIR Aliases  AtCDC48C

0 Gene Rifs

1 Organism

21 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3464  
Location: Chr5:809830-813293 reverse strand

Gene models - AtCDC48C AT5G03340

? Gene models

Transcripts: 1  Exons: 5  Introns: 4 

Overlapping Features

? Genome features that overlap coordinates of this Gene

6 Child Features

1 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
CD48E_ARATH function Probably functions in cell division and growth processes. Interacts with certain SNAREs as part of specialized membrane fusion events where vesicles from the same organelle fuse (homotypic fusion) (By similarity).
CD48E_ARATH similarity Belongs to the AAA ATPase family.
CD48E_ARATH subcellular location Primarily localized to the nucleus and, during cytokinesis, to the phragmoplast, a site where membrane vesicles are targeted in the deposition of new cell wall materials.

1 Proteins

Function

Gene Ontology

cellular component
Golgi apparatus  ? ECO  
plasma membrane  ? ECO  
cytoskeleton  ? ECO  
nucleus  ? ECO  
phragmoplast  ? ECO  
plant-type cell wall  ? ECO  
molecular function
ATP binding  ? ECO  
ATP hydrolysis activity  ? ECO  
biological process
protein transport  ? ECO  
cell division  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets