Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
Antisense lncRNA: 1, CDSs: 11, Exons: 12, Five Prime UTRs: 2, Genes: 2, mRNAs: 4, Three Prime UTRs: 2
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
SDIR1_ARATH | developmental stage | Expressed at all developmental stages. |
SDIR1_ARATH | function | E3 ubiquitin-protein ligase that acts as a positive regulator of abscisic acid-related stress signal transduction (PubMed:17573536, PubMed:18685183). Interacts with and ubiquitinates ATP1/SDIRIP1 to modulate ATP1/SDIRIP1 stability through the 26S proteasome pathway. Regulates abscisic acid (ABA) and salt stress responses by negatively affecting ATP1/SDIRIP1 stability. The SDIR1-ATP1/SDIRIP1 complex plays an important role in ABA signaling through the ubiquitination pathway (PubMed:25616872). |
SDIR1_ARATH | tissue specificity | Ubiquitous. |
Function
Gene Ontology
cellular component | |
---|---|
intracellular membrane-bounded organelle | ECO |
endoplasmic reticulum membrane | ECO |
molecular function | |
ubiquitin protein ligase activity | ECO |
ubiquitin-protein transferase activity | ECO |
metal ion binding | ECO |
biological process | |
protein ubiquitination | ECO |
response to salt stress | ECO |
response to abscisic acid | ECO |
ubiquitin-dependent protein catabolic process | ECO |
positive regulation of abscisic acid-activated signaling pathway | ECO |
response to water deprivation | ECO |