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Gene : MC4 A. thaliana

DB identifier  ? AT1G79340 Secondary Identifier  ? locus:2207350
Name  ? metacaspase 4 Brief Description  metacaspase 4
TAIR Computational Description  metacaspase 4;(source:Araport11)
TAIR Curator Summary  Encodes MCP2d, the predominant and constitutively expressed member of type II metacaspases (MCPs). MCP2d plays a positive regulatory role in biotic and abiotic stress-induced programmed cell death (PCD). Arabidopsis contains three type I MCP genes (MCP1a-c) and six type II MCP genes (MCP2a�f): AtMCP1a/At5g64240, AtMCP1b/At1g02170, AtMCP1c/At4g25110, AtMCP2a/At1g79310, AtMCP2b/At1g79330, AtMCP2c/At1g79320, AtMCP2d/At1g79340, AtMCP2e/At1g16420, AtMCP2f/At5g04200. The mRNA is cell-to-cell mobile.
TAIR Short Description  metacaspase 4
TAIR Aliases  AtMC4, AtMCP2d, MC4, MCA4, MCP2d

3 Gene Rifs

1 Organism

15 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2052  
Location: Chr1:29842587-29844638

Gene models - MC4 AT1G79340

? Gene models

Transcripts: 1  Exons: 2  Introns: 1 

Overlapping Features

? Genome features that overlap coordinates of this Gene

3 Child Features

0 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
MCA4_ARATH function Cysteine protease that cleaves specifically after arginine or lysine residues. Does not cleave caspase-specific substrates. Plays a positive regulatory role in biotic and abiotic stress-induced programmed cell death.
MCA4_ARATH similarity Belongs to the peptidase C14B family.
MCA4_ARATH tissue specificity Expressed in roots, cotyledons, leaves, cauline leaves, pollen and embryos.

1 Proteins

Function

Gene Ontology

cellular component
plasmodesma  ? ECO  
cytosol  ? ECO  
plasma membrane  ? ECO  
cytoplasm  ? ECO  
mitochondrion  ? ECO  
molecular function
identical protein binding  ? ECO  
cysteine-type endopeptidase activity  ? ECO  
cysteine-type peptidase activity  ? ECO  
biological process
positive regulation of programmed cell death  ? ECO  
defense response  ? ECO  
protein autoprocessing  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets