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Gene : SPL13A A. thaliana

DB identifier  ? AT5G50570 Secondary Identifier  ? locus:2159717
Name  ? SQUAMOSA PROMOTER-BINDING PROTEIN LIKE 13A Brief Description  Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein
TAIR Computational Description  Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein;(source:Araport11)
TAIR Curator Summary  Together with SPL13B involved in floral transition. Expression reduced by Verticillium dahliae SRNAs which affects the plant's miR157d which targets SPL13A and B.
TAIR Short Description  Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein
TAIR Aliases  SPL13, SPL13A

1 Gene Rifs

1 Organism

19 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2639  
Location: Chr5:20582083-20584721 reverse strand

Gene models - SPL13A AT5G50570

? Gene models

Transcripts: 2  Exons: 7  Introns: 5 

Overlapping Features

? Genome features that overlap coordinates of this Gene

7 Child Features

1 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
SP13A_ARATH developmental stage Weak increase of expression during floral induction.
SP13A_ARATH function Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'.

1 Proteins

Function

Gene Ontology

cellular component
nucleus  ? ECO  
molecular function
DNA-binding transcription factor activity  ? ECO  
DNA binding  ? ECO  
metal ion binding  ? ECO  
biological process
anther development  ? ECO  
regulation of DNA-templated transcription  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
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Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets