Genomics
Overlapping Features
Genome features that overlap coordinates of this Exon
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G67110:CDS:5 | 66 | Chr5: 26785618-26785683 | Arabidopsis thaliana |
AT5G67110:CDS:5.1 | 66 | Chr5: 26785618-26785683 | Arabidopsis thaliana |
AT5G67110:CDS:3 | 66 | Chr5: 26785762-26785827 | Arabidopsis thaliana |
AT5G67110:CDS:4 | 144 | Chr5: 26785684-26785827 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G67100:exon:33 | 1144 | Chr5: 26785288-26786431 | Arabidopsis thaliana |
AT5G67110:exon:6 | 66 | Chr5: 26785618-26785683 | Arabidopsis thaliana |
AT5G67110:exon:4 | 66 | Chr5: 26785762-26785827 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G67100 | locus:2155593 | ICU2 | INCURVATA2 | 9479 | Chr5: 26776953-26786431 | A. thaliana | DNA-directed DNA polymerase;(source:Araport11) | Encodes the putative catalytic subunit of the DNA polymerase alpha. Interacts with genes involved in chromatin-mediated cellular memory. ICU2 genetically interacts with TERMINAL FLOWER2, the ortholog of HETEROCHROMATIN PROTEIN1 of animals and yeasts, and with the Polycomb group (PcG) gene CURLY LEAF. A number of regulatory genes were derepressed in the icu2-1 mutant, including genes associated with flowering time, floral meristem, and floral organ identity. Mutant has curled, involute leaves and causes early flowering. | DNA-directed DNA polymerases | ICU2 |
AT5G67110 | locus:2155503 | ALC | ALCATRAZ | 1326 | Chr5: 26785106-26786431 | A. thaliana | basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) | encodes a myc/bHLH transcription factor-like protein. Gene product is involved in fruit dehiscence. Mutant siliques fail to dehisce. | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | ALC |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G67100.2 | 5783 | Chr5: 26776953-26786431 |
AT5G67110.3 | 838 | Chr5: 26785106-26786383 |
AT5G67110.1 | 952 | Chr5: 26785106-26786431 |
AT5G67110.2 | 981 | Chr5: 26785107-26786383 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G67100:three_prime_UTR:2 | 1144 | Chr5: 26785288-26786431 | Arabidopsis thaliana |
AT5G67110:three_prime_UTR:1 | 66 | Chr5: 26785618-26785683 | Arabidopsis thaliana |