Genomics
Genome feature
| Region: |
mRNA
|
Length: |
2028
 |
| Location: | Chr5:24543582-24546269 | ||
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT5G60980:CDS:1 |
180
|
Chr5: 24543988-24544167 | Arabidopsis thaliana |
| AT5G60980:CDS:2 |
298
|
Chr5: 24544258-24544555 | Arabidopsis thaliana |
| AT5G60980:CDS:3 |
221
|
Chr5: 24544656-24544876 | Arabidopsis thaliana |
| AT5G60980:CDS:4 |
169
|
Chr5: 24544977-24545145 | Arabidopsis thaliana |
| AT5G60980:CDS:5 |
122
|
Chr5: 24545231-24545352 | Arabidopsis thaliana |
| AT5G60980:CDS:6 |
66
|
Chr5: 24545429-24545494 | Arabidopsis thaliana |
| AT5G60980:CDS:8 |
64
|
Chr5: 24545605-24545668 | Arabidopsis thaliana |
| AT5G60980:CDS:9 |
263
|
Chr5: 24545765-24546027 | Arabidopsis thaliana |
| AT5G60980:CDS:1.1 |
180
|
Chr5: 24543988-24544167 | Arabidopsis thaliana |
| AT5G60980:CDS:2.1 |
298
|
Chr5: 24544258-24544555 | Arabidopsis thaliana |
| AT5G60980:CDS:3.1 |
221
|
Chr5: 24544656-24544876 | Arabidopsis thaliana |
| AT5G60980:CDS:4.1 |
169
|
Chr5: 24544977-24545145 | Arabidopsis thaliana |
| AT5G60980:CDS:5.1 |
122
|
Chr5: 24545231-24545352 | Arabidopsis thaliana |
| AT5G60980:CDS:6.1 |
66
|
Chr5: 24545429-24545494 | Arabidopsis thaliana |
| AT5G60980:CDS:8.1 |
64
|
Chr5: 24545605-24545668 | Arabidopsis thaliana |
| AT5G60980:CDS:9.1 |
263
|
Chr5: 24545765-24546027 | Arabidopsis thaliana |
| AT5G60980:CDS:1.2 |
180
|
Chr5: 24543988-24544167 | Arabidopsis thaliana |
| AT5G60980:CDS:2.2 |
298
|
Chr5: 24544258-24544555 | Arabidopsis thaliana |
| AT5G60980:CDS:3.2 |
221
|
Chr5: 24544656-24544876 | Arabidopsis thaliana |
| AT5G60980:CDS:4.2 |
169
|
Chr5: 24544977-24545145 | Arabidopsis thaliana |
| AT5G60980:CDS:5.2 |
122
|
Chr5: 24545231-24545352 | Arabidopsis thaliana |
| AT5G60980:CDS:7 |
63
|
Chr5: 24545432-24545494 | Arabidopsis thaliana |
| AT5G60980:CDS:8.2 |
64
|
Chr5: 24545605-24545668 | Arabidopsis thaliana |
| AT5G60980:CDS:9.2 |
263
|
Chr5: 24545765-24546027 | Arabidopsis thaliana |
| AT5G60980:CDS:1.3 |
180
|
Chr5: 24543988-24544167 | Arabidopsis thaliana |
| AT5G60980:CDS:2.3 |
298
|
Chr5: 24544258-24544555 | Arabidopsis thaliana |
| AT5G60980:CDS:3.3 |
221
|
Chr5: 24544656-24544876 | Arabidopsis thaliana |
| AT5G60980:CDS:4.3 |
169
|
Chr5: 24544977-24545145 | Arabidopsis thaliana |
| AT5G60980:CDS:5.3 |
122
|
Chr5: 24545231-24545352 | Arabidopsis thaliana |
| AT5G60980:CDS:7.1 |
63
|
Chr5: 24545432-24545494 | Arabidopsis thaliana |
Exons
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT5G60980:exon:15 |
588
|
Chr5: 24545765-24546352 | Arabidopsis thaliana |
| AT5G60980:exon:3 |
932
|
Chr5: 24543236-24544167 | Arabidopsis thaliana |
| AT5G60980:exon:10 |
66
|
Chr5: 24545429-24545494 | Arabidopsis thaliana |
| AT5G60980:exon:5 |
180
|
Chr5: 24543988-24544167 | Arabidopsis thaliana |
| AT5G60980:exon:14 |
553
|
Chr5: 24545765-24546317 | Arabidopsis thaliana |
| AT5G60980:exon:4 |
586
|
Chr5: 24543582-24544167 | Arabidopsis thaliana |
| AT5G60980:exon:6 |
298
|
Chr5: 24544258-24544555 | Arabidopsis thaliana |
| AT5G60980:exon:7 |
221
|
Chr5: 24544656-24544876 | Arabidopsis thaliana |
| AT5G60980:exon:8 |
169
|
Chr5: 24544977-24545145 | Arabidopsis thaliana |
| AT5G60980:exon:9 |
122
|
Chr5: 24545231-24545352 | Arabidopsis thaliana |
| AT5G60980:exon:11 |
63
|
Chr5: 24545432-24545494 | Arabidopsis thaliana |
| AT5G60980:exon:12 |
64
|
Chr5: 24545605-24545668 | Arabidopsis thaliana |
| AT5G60980:exon:13 |
505
|
Chr5: 24545765-24546269 | Arabidopsis thaliana |
Five Prime UTRs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT5G60980:five_prime_UTR:3 |
752
|
Chr5: 24543236-24543987 | Arabidopsis thaliana |
| AT5G60980:five_prime_UTR:4 |
406
|
Chr5: 24543582-24543987 | Arabidopsis thaliana |
Genes
| DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
|---|---|---|---|---|---|---|---|---|---|---|
| AT5G60980 | locus:2173567 | AT5G60980 |
3217
|
Chr5: 24543136-24546352 | A. thaliana | Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein;(source:Araport11) | NULL | Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain | AtG3BP-1, AtG3BP8, NTF2 |
mRNAs
| DB identifier | Length | Chromosome Location |
|---|---|---|
| AT5G60980.2 |
2052
|
Chr5: 24543136-24546352 |
| AT5G60980.3 |
2425
|
Chr5: 24543236-24546317 |
| AT5G60980.1 |
1914
|
Chr5: 24543236-24546317 |
Three Prime UTRs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT5G60980:three_prime_UTR:3 |
325
|
Chr5: 24546028-24546352 | Arabidopsis thaliana |
| AT5G60980:three_prime_UTR:2 |
290
|
Chr5: 24546028-24546317 | Arabidopsis thaliana |
| AT5G60980:three_prime_UTR:1 |
242
|
Chr5: 24546028-24546269 | Arabidopsis thaliana |
