Genomics
Overlapping Features
Genome features that overlap coordinates of this TransposonFragment
Exon: 1, Genes: 2, Intergenic Regions: 2, mRNA: 1, miRNA: 1, miRNA Primary Transcript: 1, Three Prime UTR: 1, Transposable Element: 1
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G57840:exon:4 | 673 | Chr5: 23432790-23433462 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G08800 | MIR8167e | 75 | Chr5: 23431703-23431777 | A. thaliana | microRNA ath-MIR8167e precursor;(source:Araport11) | NULL | ath-MIR8167e | |||
AT5G57840 | locus:2174423 | AT5G57840 | 2477 | Chr5: 23432790-23435266 | A. thaliana | HXXXD-type acyl-transferase family protein;(source:Araport11) | encodes a protein whose sequence is similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase from Dianthus caryophyllus (gi:2239091) | HXXXD-type acyl-transferase family protein |
Intergenic Regions
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
intergenic_region_chrChr5_23431490..23431702 | 213 | Chr5: 23431490-23431702 | Arabidopsis thaliana |
intergenic_region_chrChr5_23431778..23432789 | 1012 | Chr5: 23431778-23432789 | Arabidopsis thaliana |
miRNA Primary Transcripts
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G08800.1 | 75 | Chr5: 23431703-23431777 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G57840:three_prime_UTR:1 | 155 | Chr5: 23432790-23432944 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5TE84250 | 1340 | Chr5: 23431544-23432883 | Arabidopsis thaliana |