Genomics
Genome feature
| Region: |
mRNA
|
Length: |
2788
 |
| Location: | Chr5:22686473-22689671 | ||
| Transcript | Exons | Introns | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
HSP81-2
AT5G56030.1
2788 |
|
|
||||||||||
|
HSP81-2
AT5G56030.2
2316 |
|
|
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT5G56030:CDS:1 |
123
|
Chr5: 22686923-22687045 | Arabidopsis thaliana |
| AT5G56030:CDS:3 |
142
|
Chr5: 22687351-22687492 | Arabidopsis thaliana |
| AT5G56030:CDS:4 |
1835
|
Chr5: 22687599-22689433 | Arabidopsis thaliana |
| AT5G56030:CDS:2 |
210
|
Chr5: 22686923-22687132 | Arabidopsis thaliana |
| AT5G56030:CDS:3.1 |
142
|
Chr5: 22687351-22687492 | Arabidopsis thaliana |
| AT5G56030:CDS:4.1 |
1835
|
Chr5: 22687599-22689433 | Arabidopsis thaliana |
Exons
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT5G56030:exon:1 |
573
|
Chr5: 22686473-22687045 | Arabidopsis thaliana |
| AT5G56030:exon:5 |
2073
|
Chr5: 22687599-22689671 | Arabidopsis thaliana |
| AT5G56030:exon:2 |
301
|
Chr5: 22686832-22687132 | Arabidopsis thaliana |
| AT5G56030:exon:3 |
142
|
Chr5: 22687351-22687492 | Arabidopsis thaliana |
| AT5G56030:exon:4 |
1873
|
Chr5: 22687599-22689471 | Arabidopsis thaliana |
Five Prime UTRs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT5G56030:five_prime_UTR:1 |
450
|
Chr5: 22686473-22686922 | Arabidopsis thaliana |
| AT5G56030:five_prime_UTR:2 |
91
|
Chr5: 22686832-22686922 | Arabidopsis thaliana |
Genes
| DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
|---|---|---|---|---|---|---|---|---|---|---|
| AT5G56030 | locus:2161815 | HSP81-2 | heat shock protein 81-2 |
3199
|
Chr5: 22686473-22689671 | A. thaliana | heat shock protein 81-2;(source:Araport11) | A member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Interacts with HsfA1d in the cytosol and the nucleus and negatively regulates HsfA1d. Did not bind to AtHsfA4c. The mRNA is cell-to-cell mobile. | heat shock protein 81-2 | AtHsp90.2, ERD8, HSP81-2, HSP81.2, HSP90.2 |
Three Prime UTRs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT5G56030:three_prime_UTR:2 |
238
|
Chr5: 22689434-22689671 | Arabidopsis thaliana |
| AT5G56030:three_prime_UTR:1 |
38
|
Chr5: 22689434-22689471 | Arabidopsis thaliana |
