Genomics
Transcript | Exons | Introns | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
D6PK
AT5G55910.2
2402 |
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D6PK
AT5G55910.1
2156 |
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Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G55910:CDS:2 | 862 | Chr5: 22640055-22640916 | Arabidopsis thaliana |
AT5G55910:CDS:1 | 635 | Chr5: 22641000-22641634 | Arabidopsis thaliana |
AT5G55910:CDS:2.1 | 862 | Chr5: 22640055-22640916 | Arabidopsis thaliana |
AT5G55910:CDS:1.1 | 635 | Chr5: 22641000-22641634 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G55900:exon:7 | 650 | Chr5: 22639179-22639828 | Arabidopsis thaliana |
AT5G55910:exon:2 | 552 | Chr5: 22641863-22642414 | Arabidopsis thaliana |
AT5G55910:exon:4 | 1104 | Chr5: 22639813-22640916 | Arabidopsis thaliana |
AT5G55910:exon:3 | 746 | Chr5: 22641000-22641745 | Arabidopsis thaliana |
AT5G55910:exon:1 | 306 | Chr5: 22642109-22642414 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G55910:five_prime_UTR:2 | 552 | Chr5: 22641863-22642414 | Arabidopsis thaliana |
AT5G55910:five_prime_UTR:3 | 111 | Chr5: 22641635-22641745 | Arabidopsis thaliana |
AT5G55910:five_prime_UTR:1 | 306 | Chr5: 22642109-22642414 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G55900 | locus:2178383 | AT5G55900 | 2319 | Chr5: 22637510-22639828 | A. thaliana | Sucrase/ferredoxin-like family protein;(source:Araport11) | NULL | Sucrase/ferredoxin-like family protein | ||
AT5G55910 | locus:2178388 | D6PK | D6 protein kinase | 2602 | Chr5: 22639813-22642414 | A. thaliana | D6 protein kinase;(source:Araport11) | Member of AGC VIIIa Kinase family. D6PK is a protein kinase involved that plays a role in polar auxin transport. Most likely acts redundantly with the related proteins: D6PKL1,D6PKL2,and D6PKL3. PIN1 is a target of D6PK phosphorylation. D6PK is associated with sterol enriched membrane rafts and may be involved in regulation of the switch from basal to planar polarity during root hair initiation. Involved in pulse-induced phototropism but also for time-dependent second positive phototropism. Works with PIN3 in the same genetic pathway of hypocotyl phototropism under all light conditions. Involved in the generation of auxin asymmetrical distribution induced by phototropic stimulation. | D6 protein kinase | AGC1-1, D6PK |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G55900.1 | 1570 | Chr5: 22637510-22639828 |
AT5G55910.2 | 2402 | Chr5: 22639813-22642414 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G55900:three_prime_UTR:2 | 226 | Chr5: 22639603-22639828 | Arabidopsis thaliana |
AT5G55910:three_prime_UTR:1 | 242 | Chr5: 22639813-22640054 | Arabidopsis thaliana |