Genomics
Overlapping Features
Genome features that overlap coordinates of this Exon
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G53060:CDS:11 | 23 | Chr5: 21520288-21520310 | Arabidopsis thaliana |
AT5G53070:CDS:5 | 165 | Chr5: 21520003-21520167 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G53060:exon:12 | 134 | Chr5: 21520288-21520421 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G53060 | locus:2168367 | RCF3 | regulator of CBF gene expression 3 | 5526 | Chr5: 21514896-21520421 | A. thaliana | RNA-binding KH domain-containing protein;(source:Araport11) | Encodes a KH domain-containing putative RNA-binding protein RCF3. Functions as a upstream regulator for heat stress-responsive gene expression and thermotolerance and mediation of jasmonate signalling.Also shown to interact with HYL1 and is a component of the nuclear dicing body and to function in primary miRNA processing. | RNA-binding KH domain-containing protein | AtKH28, ESR1, HOS5, RCF3, SHI1 |
AT5G53070 | locus:2168377 | AT5G53070 | 1829 | Chr5: 21518593-21520421 | A. thaliana | Ribosomal protein L9/RNase H1;(source:Araport11) | NULL | Ribosomal protein L9/RNase H1 | bL9m |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G53060.2 | 1037 | Chr5: 21515026-21520421 |
AT5G53070.1 | 1061 | Chr5: 21518593-21520421 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G53060:three_prime_UTR:3 | 111 | Chr5: 21520311-21520421 | Arabidopsis thaliana |
AT5G53070:three_prime_UTR:1 | 254 | Chr5: 21520168-21520421 | Arabidopsis thaliana |