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Gene : AT5G46920 A. thaliana

DB identifier  ? AT5G46920 Secondary Identifier  ? locus:2170992
Brief Description  Intron maturase, type II family protein
TAIR Computational Description  Intron maturase, type II family protein;(source:Araport11)
TAIR Curator Summary  NULL
TAIR Short Description  Intron maturase, type II family protein

2 Gene Rifs

1 Organism

12 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2602  
Location: Chr5:19053472-19056073

Gene models - AT5G46920 AT5G46920

? Gene models

Transcripts: 1  Exons: 1 

Overlapping Features

? Genome features that overlap coordinates of this Gene

2 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
NMAT2_ARATH function Nuclear-encoded maturase required for splicing of group-II introns in mitochondria. Involved in the splicing of mitochondrial COX2, NAD1 and NAD7 transcripts (PubMed:19946041). Necessary for mitochondrial biogenesis during early developmental stages (PubMed:22429648).
NMAT2_ARATH similarity Belongs to the plant nuclear intron maturase (nMat) family.

1 Proteins

Function

Gene Ontology

cellular component
mitochondrion  ? ECO  
molecular function
endonuclease activity  ? ECO  
biological process
mitochondrion organization  ? ECO  
intron homing  ? ECO  
mitochondrial mRNA processing  ? ECO  
Group II intron splicing  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets