Genomics
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs: 23, Exons: 14, Five Prime UTRs: 2, Gene: 1, mRNA: 1, Three Prime UTRs: 2, Transposable Element: 1, Transposon Fragment: 1
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G45610:CDS:13 | 265 | Chr5: 18496397-18496661 | Arabidopsis thaliana |
AT5G45610:CDS:11 | 197 | Chr5: 18496743-18496939 | Arabidopsis thaliana |
AT5G45610:CDS:10 | 158 | Chr5: 18497031-18497188 | Arabidopsis thaliana |
AT5G45610:CDS:9 | 107 | Chr5: 18497295-18497401 | Arabidopsis thaliana |
AT5G45610:CDS:8 | 141 | Chr5: 18497483-18497623 | Arabidopsis thaliana |
AT5G45610:CDS:7 | 83 | Chr5: 18497746-18497828 | Arabidopsis thaliana |
AT5G45610:CDS:6 | 69 | Chr5: 18497936-18498004 | Arabidopsis thaliana |
AT5G45610:CDS:5 | 287 | Chr5: 18498091-18498377 | Arabidopsis thaliana |
AT5G45610:CDS:4 | 74 | Chr5: 18498488-18498561 | Arabidopsis thaliana |
AT5G45610:CDS:3 | 119 | Chr5: 18498941-18499059 | Arabidopsis thaliana |
AT5G45610:CDS:2 | 39 | Chr5: 18499147-18499185 | Arabidopsis thaliana |
AT5G45610:CDS:1 | 402 | Chr5: 18499272-18499673 | Arabidopsis thaliana |
AT5G45610:CDS:12 | 243 | Chr5: 18496697-18496939 | Arabidopsis thaliana |
AT5G45610:CDS:10.1 | 158 | Chr5: 18497031-18497188 | Arabidopsis thaliana |
AT5G45610:CDS:9.1 | 107 | Chr5: 18497295-18497401 | Arabidopsis thaliana |
AT5G45610:CDS:8.1 | 141 | Chr5: 18497483-18497623 | Arabidopsis thaliana |
AT5G45610:CDS:7.1 | 83 | Chr5: 18497746-18497828 | Arabidopsis thaliana |
AT5G45610:CDS:6.1 | 69 | Chr5: 18497936-18498004 | Arabidopsis thaliana |
AT5G45610:CDS:5.1 | 287 | Chr5: 18498091-18498377 | Arabidopsis thaliana |
AT5G45610:CDS:4.1 | 74 | Chr5: 18498488-18498561 | Arabidopsis thaliana |
AT5G45610:CDS:3.1 | 119 | Chr5: 18498941-18499059 | Arabidopsis thaliana |
AT5G45610:CDS:2.1 | 39 | Chr5: 18499147-18499185 | Arabidopsis thaliana |
AT5G45610:CDS:1.1 | 402 | Chr5: 18499272-18499673 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G45610:exon:14 | 434 | Chr5: 18496228-18496661 | Arabidopsis thaliana |
AT5G45610:exon:12 | 197 | Chr5: 18496743-18496939 | Arabidopsis thaliana |
AT5G45610:exon:1 | 617 | Chr5: 18499272-18499888 | Arabidopsis thaliana |
AT5G45610:exon:13 | 684 | Chr5: 18496256-18496939 | Arabidopsis thaliana |
AT5G45610:exon:11 | 158 | Chr5: 18497031-18497188 | Arabidopsis thaliana |
AT5G45610:exon:10 | 107 | Chr5: 18497295-18497401 | Arabidopsis thaliana |
AT5G45610:exon:9 | 141 | Chr5: 18497483-18497623 | Arabidopsis thaliana |
AT5G45610:exon:8 | 83 | Chr5: 18497746-18497828 | Arabidopsis thaliana |
AT5G45610:exon:7 | 69 | Chr5: 18497936-18498004 | Arabidopsis thaliana |
AT5G45610:exon:6 | 287 | Chr5: 18498091-18498377 | Arabidopsis thaliana |
AT5G45610:exon:5 | 74 | Chr5: 18498488-18498561 | Arabidopsis thaliana |
AT5G45610:exon:4 | 119 | Chr5: 18498941-18499059 | Arabidopsis thaliana |
AT5G45610:exon:3 | 39 | Chr5: 18499147-18499185 | Arabidopsis thaliana |
AT5G45610:exon:2 | 466 | Chr5: 18499272-18499737 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G45610:five_prime_UTR:1 | 215 | Chr5: 18499674-18499888 | Arabidopsis thaliana |
AT5G45610:five_prime_UTR:2 | 64 | Chr5: 18499674-18499737 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G45610 | locus:2171993 | SUV2 | SENSITIVE TO UV 2 | 3661 | Chr5: 18496228-18499888 | A. thaliana | protein dimerization;(source:Araport11) | Encodes a homologue of the ATR-interacting protein ATRIP. Mutant (named sensitive to UV2 or suv2) is UVB-hypersensitive and defective in DNA damage response. | protein dimerizations | SUV2 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G45610:three_prime_UTR:2 | 169 | Chr5: 18496228-18496396 | Arabidopsis thaliana |
AT5G45610:three_prime_UTR:1 | 441 | Chr5: 18496256-18496696 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5TE66575 | 704 | Chr5: 18499818-18500521 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5TE66575:transposon_fragment:1 | 704 | Chr5: 18499818-18500521 | Arabidopsis thaliana |