Genomics
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G42540:CDS:1 | 313 | Chr5: 17007513-17007825 | Arabidopsis thaliana |
AT5G42540:CDS:2 | 77 | Chr5: 17007925-17008001 | Arabidopsis thaliana |
AT5G42540:CDS:3 | 192 | Chr5: 17008468-17008659 | Arabidopsis thaliana |
AT5G42540:CDS:4 | 120 | Chr5: 17008743-17008862 | Arabidopsis thaliana |
AT5G42540:CDS:5 | 63 | Chr5: 17008986-17009048 | Arabidopsis thaliana |
AT5G42540:CDS:6 | 150 | Chr5: 17009280-17009429 | Arabidopsis thaliana |
AT5G42540:CDS:7 | 159 | Chr5: 17009540-17009698 | Arabidopsis thaliana |
AT5G42540:CDS:8 | 78 | Chr5: 17010089-17010166 | Arabidopsis thaliana |
AT5G42540:CDS:9 | 87 | Chr5: 17010250-17010336 | Arabidopsis thaliana |
AT5G42540:CDS:10 | 231 | Chr5: 17010953-17011183 | Arabidopsis thaliana |
AT5G42540:CDS:11 | 96 | Chr5: 17011372-17011467 | Arabidopsis thaliana |
AT5G42540:CDS:12 | 96 | Chr5: 17011602-17011697 | Arabidopsis thaliana |
AT5G42540:CDS:13 | 71 | Chr5: 17011793-17011863 | Arabidopsis thaliana |
AT5G42540:CDS:14 | 129 | Chr5: 17012330-17012458 | Arabidopsis thaliana |
AT5G42540:CDS:15 | 77 | Chr5: 17012536-17012612 | Arabidopsis thaliana |
AT5G42540:CDS:16 | 41 | Chr5: 17012693-17012733 | Arabidopsis thaliana |
AT5G42540:CDS:17 | 75 | Chr5: 17012842-17012916 | Arabidopsis thaliana |
AT5G42540:CDS:18 | 158 | Chr5: 17013007-17013164 | Arabidopsis thaliana |
AT5G42540:CDS:20 | 105 | Chr5: 17013335-17013439 | Arabidopsis thaliana |
AT5G42540:CDS:21 | 82 | Chr5: 17013565-17013646 | Arabidopsis thaliana |
AT5G42540:CDS:22 | 95 | Chr5: 17013800-17013894 | Arabidopsis thaliana |
AT5G42540:CDS:23 | 544 | Chr5: 17013991-17014534 | Arabidopsis thaliana |
AT5G42540:CDS:1.1 | 313 | Chr5: 17007513-17007825 | Arabidopsis thaliana |
AT5G42540:CDS:2.1 | 77 | Chr5: 17007925-17008001 | Arabidopsis thaliana |
AT5G42540:CDS:3.1 | 192 | Chr5: 17008468-17008659 | Arabidopsis thaliana |
AT5G42540:CDS:4.1 | 120 | Chr5: 17008743-17008862 | Arabidopsis thaliana |
AT5G42540:CDS:5.1 | 63 | Chr5: 17008986-17009048 | Arabidopsis thaliana |
AT5G42540:CDS:6.1 | 150 | Chr5: 17009280-17009429 | Arabidopsis thaliana |
AT5G42540:CDS:7.1 | 159 | Chr5: 17009540-17009698 | Arabidopsis thaliana |
AT5G42540:CDS:8.1 | 78 | Chr5: 17010089-17010166 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G42540:exon:1 | 460 | Chr5: 17007366-17007825 | Arabidopsis thaliana |
AT5G42540:exon:21 | 105 | Chr5: 17013335-17013439 | Arabidopsis thaliana |
AT5G42540:exon:25 | 856 | Chr5: 17013991-17014846 | Arabidopsis thaliana |
AT5G42540:exon:2 | 437 | Chr5: 17007389-17007825 | Arabidopsis thaliana |
AT5G42540:exon:3 | 77 | Chr5: 17007925-17008001 | Arabidopsis thaliana |
AT5G42540:exon:4 | 192 | Chr5: 17008468-17008659 | Arabidopsis thaliana |
AT5G42540:exon:5 | 120 | Chr5: 17008743-17008862 | Arabidopsis thaliana |
AT5G42540:exon:6 | 63 | Chr5: 17008986-17009048 | Arabidopsis thaliana |
AT5G42540:exon:7 | 150 | Chr5: 17009280-17009429 | Arabidopsis thaliana |
AT5G42540:exon:8 | 159 | Chr5: 17009540-17009698 | Arabidopsis thaliana |
AT5G42540:exon:9 | 78 | Chr5: 17010089-17010166 | Arabidopsis thaliana |
AT5G42540:exon:10 | 87 | Chr5: 17010250-17010336 | Arabidopsis thaliana |
AT5G42540:exon:11 | 231 | Chr5: 17010953-17011183 | Arabidopsis thaliana |
AT5G42540:exon:12 | 96 | Chr5: 17011372-17011467 | Arabidopsis thaliana |
AT5G42540:exon:13 | 96 | Chr5: 17011602-17011697 | Arabidopsis thaliana |
AT5G42540:exon:14 | 71 | Chr5: 17011793-17011863 | Arabidopsis thaliana |
AT5G42540:exon:15 | 129 | Chr5: 17012330-17012458 | Arabidopsis thaliana |
AT5G42540:exon:16 | 77 | Chr5: 17012536-17012612 | Arabidopsis thaliana |
AT5G42540:exon:17 | 41 | Chr5: 17012693-17012733 | Arabidopsis thaliana |
AT5G42540:exon:18 | 75 | Chr5: 17012842-17012916 | Arabidopsis thaliana |
AT5G42540:exon:19 | 158 | Chr5: 17013007-17013164 | Arabidopsis thaliana |
AT5G42540:exon:20 | 138 | Chr5: 17013302-17013439 | Arabidopsis thaliana |
AT5G42540:exon:22 | 82 | Chr5: 17013565-17013646 | Arabidopsis thaliana |
AT5G42540:exon:23 | 95 | Chr5: 17013800-17013894 | Arabidopsis thaliana |
AT5G42540:exon:24 | 806 | Chr5: 17013991-17014796 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G42540:five_prime_UTR:1 | 147 | Chr5: 17007366-17007512 | Arabidopsis thaliana |
AT5G42540:five_prime_UTR:2 | 124 | Chr5: 17007389-17007512 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G42540 | locus:2152676 | XRN2 | exoribonuclease 2 | 7481 | Chr5: 17007366-17014846 | A. thaliana | exoribonuclease 2;(source:Araport11) | Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN2 acts as a suppressor of posttranscriptional gene silencing. | exoribonuclease 2 | AtXRN2, XRN2 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G42540:three_prime_UTR:2 | 312 | Chr5: 17014535-17014846 | Arabidopsis thaliana |
AT5G42540:three_prime_UTR:1 | 262 | Chr5: 17014535-17014796 | Arabidopsis thaliana |