Genomics
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs: 9, Exons: 7, Five Prime UTRs: 2, Gene: 1, mRNA: 1, Three Prime UTRs: 2, Transposable Element: 1, Transposon Fragment: 1
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G42420:CDS:1 | 139 | Chr5: 16968819-16968957 | Arabidopsis thaliana |
AT5G42420:CDS:2 | 185 | Chr5: 16969044-16969228 | Arabidopsis thaliana |
AT5G42420:CDS:3 | 201 | Chr5: 16969340-16969540 | Arabidopsis thaliana |
AT5G42420:CDS:4 | 162 | Chr5: 16969628-16969789 | Arabidopsis thaliana |
AT5G42420:CDS:5 | 366 | Chr5: 16969860-16970225 | Arabidopsis thaliana |
AT5G42420:CDS:1.1 | 139 | Chr5: 16968819-16968957 | Arabidopsis thaliana |
AT5G42420:CDS:2.1 | 185 | Chr5: 16969044-16969228 | Arabidopsis thaliana |
AT5G42420:CDS:4.1 | 162 | Chr5: 16969628-16969789 | Arabidopsis thaliana |
AT5G42420:CDS:5.1 | 366 | Chr5: 16969860-16970225 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G42420:exon:1 | 303 | Chr5: 16968655-16968957 | Arabidopsis thaliana |
AT5G42420:exon:4 | 201 | Chr5: 16969340-16969540 | Arabidopsis thaliana |
AT5G42420:exon:7 | 668 | Chr5: 16969860-16970527 | Arabidopsis thaliana |
AT5G42420:exon:2 | 300 | Chr5: 16968658-16968957 | Arabidopsis thaliana |
AT5G42420:exon:3 | 185 | Chr5: 16969044-16969228 | Arabidopsis thaliana |
AT5G42420:exon:5 | 162 | Chr5: 16969628-16969789 | Arabidopsis thaliana |
AT5G42420:exon:6 | 571 | Chr5: 16969860-16970430 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G42420:five_prime_UTR:1 | 164 | Chr5: 16968655-16968818 | Arabidopsis thaliana |
AT5G42420:five_prime_UTR:2 | 161 | Chr5: 16968658-16968818 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G42420 | locus:2162271 | AT5G42420 | 1873 | Chr5: 16968655-16970527 | A. thaliana | Nucleotide-sugar transporter family protein;(source:Araport11) | NULL | Nucleotide-sugar transporter family protein | URGT3 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G42420:three_prime_UTR:2 | 302 | Chr5: 16970226-16970527 | Arabidopsis thaliana |
AT5G42420:three_prime_UTR:1 | 205 | Chr5: 16970226-16970430 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5TE61250 | 112 | Chr5: 16968568-16968679 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5TE61250:transposon_fragment:1 | 112 | Chr5: 16968568-16968679 | Arabidopsis thaliana |