Genomics
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs: 14, Exons: 15, Five Prime UTRs: 2, Gene: 1, Three Prime UTR: 1, Transposable Element: 1, Transposon Fragment: 1
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G35700:CDS:14 | 255 | Chr5: 13872833-13873087 | Arabidopsis thaliana |
AT5G35700:CDS:13 | 92 | Chr5: 13873171-13873262 | Arabidopsis thaliana |
AT5G35700:CDS:12 | 97 | Chr5: 13873374-13873470 | Arabidopsis thaliana |
AT5G35700:CDS:11 | 158 | Chr5: 13873558-13873715 | Arabidopsis thaliana |
AT5G35700:CDS:10 | 200 | Chr5: 13873892-13874091 | Arabidopsis thaliana |
AT5G35700:CDS:9 | 156 | Chr5: 13874164-13874319 | Arabidopsis thaliana |
AT5G35700:CDS:8 | 212 | Chr5: 13874542-13874753 | Arabidopsis thaliana |
AT5G35700:CDS:7 | 117 | Chr5: 13874959-13875075 | Arabidopsis thaliana |
AT5G35700:CDS:6 | 69 | Chr5: 13875162-13875230 | Arabidopsis thaliana |
AT5G35700:CDS:5 | 39 | Chr5: 13875361-13875399 | Arabidopsis thaliana |
AT5G35700:CDS:4 | 172 | Chr5: 13875497-13875668 | Arabidopsis thaliana |
AT5G35700:CDS:3 | 239 | Chr5: 13875752-13875990 | Arabidopsis thaliana |
AT5G35700:CDS:2 | 171 | Chr5: 13876087-13876257 | Arabidopsis thaliana |
AT5G35700:CDS:1 | 87 | Chr5: 13876346-13876432 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G35700:exon:15 | 609 | Chr5: 13872479-13873087 | Arabidopsis thaliana |
AT5G35700:exon:14 | 92 | Chr5: 13873171-13873262 | Arabidopsis thaliana |
AT5G35700:exon:13 | 97 | Chr5: 13873374-13873470 | Arabidopsis thaliana |
AT5G35700:exon:12 | 158 | Chr5: 13873558-13873715 | Arabidopsis thaliana |
AT5G35700:exon:11 | 200 | Chr5: 13873892-13874091 | Arabidopsis thaliana |
AT5G35700:exon:10 | 156 | Chr5: 13874164-13874319 | Arabidopsis thaliana |
AT5G35700:exon:9 | 212 | Chr5: 13874542-13874753 | Arabidopsis thaliana |
AT5G35700:exon:8 | 117 | Chr5: 13874959-13875075 | Arabidopsis thaliana |
AT5G35700:exon:7 | 69 | Chr5: 13875162-13875230 | Arabidopsis thaliana |
AT5G35700:exon:6 | 39 | Chr5: 13875361-13875399 | Arabidopsis thaliana |
AT5G35700:exon:5 | 172 | Chr5: 13875497-13875668 | Arabidopsis thaliana |
AT5G35700:exon:4 | 239 | Chr5: 13875752-13875990 | Arabidopsis thaliana |
AT5G35700:exon:3 | 171 | Chr5: 13876087-13876257 | Arabidopsis thaliana |
AT5G35700:exon:2 | 131 | Chr5: 13876346-13876476 | Arabidopsis thaliana |
AT5G35700:exon:1 | 181 | Chr5: 13876696-13876876 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G35700:five_prime_UTR:2 | 44 | Chr5: 13876433-13876476 | Arabidopsis thaliana |
AT5G35700:five_prime_UTR:1 | 181 | Chr5: 13876696-13876876 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G35700 | locus:2177291 | FIM5 | FIMBRIN5 | 4398 | Chr5: 13872479-13876876 | A. thaliana | fimbrin-like protein 2;(source:Araport11) | Encodes FIMBRIN5, an actin bundling factor required for pollen germination and pollen tube growth. Different members of the fimbrin/plastin family have diverged biochemically during evolution to generate either tight actin bundles or loose networks with distinct biochemical and biophysical properties. FIM4 generates both actin bundles and branched actin filaments whereas FIM5 only generates actin bundles. | fimbrin-like protein 2 | FIM2, FIM5 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G35700:three_prime_UTR:1 | 354 | Chr5: 13872479-13872832 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5TE49430 | 608 | Chr5: 13872075-13872682 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5TE49430:transposon_fragment:1 | 608 | Chr5: 13872075-13872682 | Arabidopsis thaliana |