Genomics
Genome feature
| Region: |
CDS
|
Length: |
104
 |
| Location: | Chr5:7747525-7747628 reverse strand | ||
Gene models -
Gene models
No results
Overlapping Features
Genome features that overlap coordinates of this CDS
CDSs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT5G23080:CDS:4.1 |
104
|
Chr5: 7747525-7747628 | Arabidopsis thaliana |
Exons
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT5G23080:exon:5 |
104
|
Chr5: 7747525-7747628 | Arabidopsis thaliana |
Genes
| DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
|---|---|---|---|---|---|---|---|---|---|---|
| AT5G23080 | locus:2178302 | TGH | TOUGH |
6081
|
Chr5: 7742940-7749020 | A. thaliana | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein;(source:Araport11) | Interacts with TATA-box binding protein 2. Contains domains with strong similarity to G-patch and SWAP domains, characteristic of RNA binding and processing proteins. Colocalizes with the splicing regulator SRp34 to subnuclear particles. It is an important component of miRNA and siRNA biogenesis. Mutants display developmental defects, including reduced plant height, polycotyly, and reduced vascularization. Strong genetic interaction between TGH and AMP1. The stability of TGH transcript was maintained by ac4C modification.TGH tanscript is highly acetylated in Arabidopsis. | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein | TGH |
mRNAs
| DB identifier | Length | Chromosome Location |
|---|---|---|
| AT5G23080.2 |
3033
|
Chr5: 7742940-7748933 |
| AT5G23080.1 |
3210
|
Chr5: 7742940-7749020 |
