Genomics
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G19350:CDS:1 | 147 | Chr5: 6518978-6519124 | Arabidopsis thaliana |
AT5G19350:CDS:2 | 478 | Chr5: 6519608-6520085 | Arabidopsis thaliana |
AT5G19350:CDS:3 | 89 | Chr5: 6520190-6520278 | Arabidopsis thaliana |
AT5G19350:CDS:5 | 131 | Chr5: 6520360-6520490 | Arabidopsis thaliana |
AT5G19350:CDS:6 | 91 | Chr5: 6520608-6520698 | Arabidopsis thaliana |
AT5G19350:CDS:7 | 147 | Chr5: 6520785-6520931 | Arabidopsis thaliana |
AT5G19350:CDS:8 | 98 | Chr5: 6521009-6521106 | Arabidopsis thaliana |
AT5G19350:CDS:9 | 97 | Chr5: 6521199-6521295 | Arabidopsis thaliana |
AT5G19350:CDS:1.1 | 147 | Chr5: 6518978-6519124 | Arabidopsis thaliana |
AT5G19350:CDS:2.1 | 478 | Chr5: 6519608-6520085 | Arabidopsis thaliana |
AT5G19350:CDS:4 | 77 | Chr5: 6520202-6520278 | Arabidopsis thaliana |
AT5G19350:CDS:5.1 | 131 | Chr5: 6520360-6520490 | Arabidopsis thaliana |
AT5G19350:CDS:6.1 | 91 | Chr5: 6520608-6520698 | Arabidopsis thaliana |
AT5G19350:CDS:7.1 | 147 | Chr5: 6520785-6520931 | Arabidopsis thaliana |
AT5G19350:CDS:8.1 | 98 | Chr5: 6521009-6521106 | Arabidopsis thaliana |
AT5G19350:CDS:9.1 | 97 | Chr5: 6521199-6521295 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G19350:exon:1 | 348 | Chr5: 6518777-6519124 | Arabidopsis thaliana |
AT5G19350:exon:4 | 89 | Chr5: 6520190-6520278 | Arabidopsis thaliana |
AT5G19350:exon:11 | 285 | Chr5: 6521199-6521483 | Arabidopsis thaliana |
AT5G19350:exon:2 | 287 | Chr5: 6518838-6519124 | Arabidopsis thaliana |
AT5G19350:exon:3 | 478 | Chr5: 6519608-6520085 | Arabidopsis thaliana |
AT5G19350:exon:5 | 77 | Chr5: 6520202-6520278 | Arabidopsis thaliana |
AT5G19350:exon:6 | 131 | Chr5: 6520360-6520490 | Arabidopsis thaliana |
AT5G19350:exon:7 | 91 | Chr5: 6520608-6520698 | Arabidopsis thaliana |
AT5G19350:exon:8 | 147 | Chr5: 6520785-6520931 | Arabidopsis thaliana |
AT5G19350:exon:9 | 98 | Chr5: 6521009-6521106 | Arabidopsis thaliana |
AT5G19350:exon:10 | 277 | Chr5: 6521199-6521475 | Arabidopsis thaliana |
AT5G19360:exon:7 | 407 | Chr5: 6521405-6521811 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G19350:five_prime_UTR:1 | 201 | Chr5: 6518777-6518977 | Arabidopsis thaliana |
AT5G19350:five_prime_UTR:2 | 140 | Chr5: 6518838-6518977 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G19350 | locus:2150215 | AT5G19350 | 2707 | Chr5: 6518777-6521483 | A. thaliana | RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) | RBP45d is a component of the U1 small nuclear ribonucleoprotein and regulates alternative splicing. | RNA-binding (RRM/RBD/RNP motifs) family protein | RBP45d | |
AT5G19360 | locus:2150225 | CPK34 | calcium-dependent protein kinase 34 | 2550 | Chr5: 6521405-6523954 | A. thaliana | calcium-dependent protein kinase 34;(source:Araport11) | member of Calcium Dependent Protein Kinase; Phosphorylates the Ser860 residue of GLR3.7. | calcium-dependent protein kinase 34 | AtCPK34, CDPK34, CPK34 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G19350.1 | 1667 | Chr5: 6518777-6521483 |
AT5G19360.1 | 2057 | Chr5: 6521405-6523954 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G19350:three_prime_UTR:2 | 188 | Chr5: 6521296-6521483 | Arabidopsis thaliana |
AT5G19350:three_prime_UTR:1 | 180 | Chr5: 6521296-6521475 | Arabidopsis thaliana |
AT5G19360:three_prime_UTR:1 | 311 | Chr5: 6521405-6521715 | Arabidopsis thaliana |