Genomics
Transcript | Exons | Introns | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SIG4
AT5G13730.1
1454 |
|
|
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G13730:CDS:4 | 288 | Chr5: 4429132-4429419 | Arabidopsis thaliana |
AT5G13730:CDS:3 | 201 | Chr5: 4429484-4429684 | Arabidopsis thaliana |
AT5G13730:CDS:2 | 363 | Chr5: 4429869-4430231 | Arabidopsis thaliana |
AT5G13730:CDS:1 | 408 | Chr5: 4430337-4430744 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G13720:exon:4 | 622 | Chr5: 4428674-4429295 | Arabidopsis thaliana |
AT5G13730:exon:4 | 325 | Chr5: 4429095-4429419 | Arabidopsis thaliana |
AT5G13730:exon:3 | 201 | Chr5: 4429484-4429684 | Arabidopsis thaliana |
AT5G13730:exon:2 | 363 | Chr5: 4429869-4430231 | Arabidopsis thaliana |
AT5G13730:exon:1 | 565 | Chr5: 4430337-4430901 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G13730:five_prime_UTR:1 | 157 | Chr5: 4430745-4430901 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G13720 | locus:2173239 | AT5G13720 | 1513 | Chr5: 4427783-4429295 | A. thaliana | Uncharacterized protein family (UPF0114);(source:Araport11) | NULL | Uncharacterised protein family (UPF0114) | ||
AT5G13730 | locus:2173249 | SIG4 | sigma factor 4 | 1807 | Chr5: 4429095-4430901 | A. thaliana | sigma factor 4;(source:Araport11) | Encodes sigma 4 factor, involved in regulating the activity of the plastid-encoded RNA polymerase PEP. Regulates the overall quantity of NDH complexes and thus influences NDH activity. | sigma factor 4 | SIG4, SIGD |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G13720:three_prime_UTR:1 | 266 | Chr5: 4429030-4429295 | Arabidopsis thaliana |
AT5G13730:three_prime_UTR:1 | 37 | Chr5: 4429095-4429131 | Arabidopsis thaliana |