Genomics
Transcript | Exons | Introns | ||||||
---|---|---|---|---|---|---|---|---|
AT5G10310.1
AT5G10310.1
849 |
|
|
||||||
AT5G10310.2
AT5G10310.2
682 |
|
|
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs: 4, Exons: 4, Five Prime UTRs: 2, Gene: 1, mRNA: 1, Three Prime UTRs: 2, Transposable Element: 1, Transposon Fragment: 1
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G10310:CDS:3 | 255 | Chr5: 3241666-3241920 | Arabidopsis thaliana |
AT5G10310:CDS:1 | 114 | Chr5: 3242014-3242127 | Arabidopsis thaliana |
AT5G10310:CDS:2 | 273 | Chr5: 3241666-3241938 | Arabidopsis thaliana |
AT5G10310:CDS:1.1 | 114 | Chr5: 3242014-3242127 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G10310:exon:4 | 482 | Chr5: 3241439-3241920 | Arabidopsis thaliana |
AT5G10310:exon:1 | 367 | Chr5: 3242014-3242380 | Arabidopsis thaliana |
AT5G10310:exon:3 | 429 | Chr5: 3241510-3241938 | Arabidopsis thaliana |
AT5G10310:exon:2 | 253 | Chr5: 3242014-3242266 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G10310:five_prime_UTR:1 | 253 | Chr5: 3242128-3242380 | Arabidopsis thaliana |
AT5G10310:five_prime_UTR:2 | 139 | Chr5: 3242128-3242266 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G10310 | locus:2145367 | AT5G10310 | 942 | Chr5: 3241439-3242380 | A. thaliana | EPIDERMAL PATTERNING FACTOR-like protein;(source:Araport11) | Member of the EPF/EPFL (epidermal patterning factor/EPF-like) gene family, which genes encode plant-specific secretory peptides, several of which play a role in controlling stomatal density and patterning in the plant epidermis, and development of reproductive structures. EPFLs function as receptor ligands for ERECTA family receptors in adjacent tissues and often triggers downstream activation of BR signaling pathways in different tissues.For example, the EPFL-ER-BZR1-NSN1 cascade that restricts megaspore mother cell differentiation. | NULL | AtEPFL1, EPFL1 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G10310:three_prime_UTR:2 | 227 | Chr5: 3241439-3241665 | Arabidopsis thaliana |
AT5G10310:three_prime_UTR:1 | 156 | Chr5: 3241510-3241665 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5TE11790 | 209 | Chr5: 3242196-3242404 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5TE11790:transposon_fragment:1 | 209 | Chr5: 3242196-3242404 | Arabidopsis thaliana |