Genomics
Transcript | Exons | Introns | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
AT5G04050.2
AT5G04050.2
2572 |
|
|
||||||||||
AT5G04050.1
AT5G04050.1
3027 |
|
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G04050:CDS:1 | 1631 | Chr5: 1096092-1097722 | Arabidopsis thaliana |
AT5G04050:CDS:3 | 387 | Chr5: 1097974-1098360 | Arabidopsis thaliana |
AT5G04050:CDS:4 | 70 | Chr5: 1098443-1098512 | Arabidopsis thaliana |
AT5G04050:CDS:2 | 1803 | Chr5: 1096092-1097894 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G04050:exon:1 | 1707 | Chr5: 1096016-1097722 | Arabidopsis thaliana |
AT5G04050:exon:3 | 387 | Chr5: 1097974-1098360 | Arabidopsis thaliana |
AT5G04050:exon:4 | 478 | Chr5: 1098443-1098920 | Arabidopsis thaliana |
AT5G04050:exon:2 | 3027 | Chr5: 1096016-1099042 | Arabidopsis thaliana |
AT5G04060:exon:1 | 417 | Chr5: 1099029-1099445 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G04050:five_prime_UTR:1 | 76 | Chr5: 1096016-1096091 | Arabidopsis thaliana |
AT5G04060:five_prime_UTR:1 | 242 | Chr5: 1099029-1099270 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G04050 | locus:2150660 | AT5G04050 | 3027 | Chr5: 1096016-1099042 | A. thaliana | RNA-directed DNA polymerase (reverse transcriptase);(source:Araport11) | Essential maturase splicing factor required for splicing of nad1 introns 1, 3 and 4, holo‐complex I biogenesis, and embryo development. | RNA-directed DNA polymerase (reverse transcriptase) | nMAT3 | |
AT5G04060 | locus:2150670 | AT5G04060 | 3030 | Chr5: 1099029-1102058 | A. thaliana | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) | NULL | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G04050.2 | 2572 | Chr5: 1096016-1098920 |
AT5G04060.1 | 2293 | Chr5: 1099029-1102058 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G04050:three_prime_UTR:2 | 408 | Chr5: 1098513-1098920 | Arabidopsis thaliana |
AT5G04050:three_prime_UTR:1 | 1148 | Chr5: 1097895-1099042 | Arabidopsis thaliana |