Genomics
Transcript | Exons | Introns | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
AT5G02140.2
AT5G02140.2
982 |
|
|
||||||||||
AT5G02140.1
AT5G02140.1
973 |
|
|
Overlapping Features
Genome features that overlap coordinates of this MRNA
Antisense lncRNAs: 2, CDSs: 5, Exons: 9, Five Prime UTRs: 2, Genes: 4, mRNAs: 3, Three Prime UTRs: 3
Antisense lncRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G00815.1 | 257 | Chr5: 423921-424177 |
AT5G00820.1 | 279 | Chr5: 424426-424704 |
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G02140:CDS:1 | 55 | Chr5: 423384-423438 | Arabidopsis thaliana |
AT5G02140:CDS:3 | 677 | Chr5: 423533-424209 | Arabidopsis thaliana |
AT5G02140:CDS:1.1 | 55 | Chr5: 423384-423438 | Arabidopsis thaliana |
AT5G02140:CDS:2 | 673 | Chr5: 423533-424205 | Arabidopsis thaliana |
AT5G02140:CDS:4 | 157 | Chr5: 424281-424437 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G02140:exon:1 | 237 | Chr5: 423202-423438 | Arabidopsis thaliana |
AT5G02140:exon:4 | 745 | Chr5: 423533-424277 | Arabidopsis thaliana |
AT5G02140:exon:2 | 143 | Chr5: 423296-423438 | Arabidopsis thaliana |
AT5G02140:exon:3 | 673 | Chr5: 423533-424205 | Arabidopsis thaliana |
AT5G02140:exon:5 | 157 | Chr5: 424281-424437 | Arabidopsis thaliana |
AT5G00815:exon:1 | 257 | Chr5: 423921-424177 | Arabidopsis thaliana |
AT5G02150:exon:12 | 560 | Chr5: 424291-424850 | Arabidopsis thaliana |
AT5G02150:exon:11 | 558 | Chr5: 424293-424850 | Arabidopsis thaliana |
AT5G00820:exon:1 | 279 | Chr5: 424426-424704 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G02140:five_prime_UTR:1 | 182 | Chr5: 423202-423383 | Arabidopsis thaliana |
AT5G02140:five_prime_UTR:2 | 88 | Chr5: 423296-423383 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G02140 | locus:2185218 | AT5G02140 | 1236 | Chr5: 423202-424437 | A. thaliana | Pathogenesis-related thaumatin superfamily protein;(source:Araport11) | Pollen expressed thaumatin like protein. | Pathogenesis-related thaumatin superfamily protein | GCTLP1 | |
AT5G00815 | AT5G00815 | 257 | Chr5: 423921-424177 | A. thaliana | Natural antisense transcript overlaps with AT5G02140;(source:Araport11) | NULL | ||||
AT5G02150 | locus:2185113 | Fes1C | Fes1C | 2088 | Chr5: 424291-426378 | A. thaliana | Fes1C;(source:Araport11) | Encodes one of the Arabidopsis orthologs of the human Hsp70-binding protein 1 (HspBP-1) and yeast Fes1p: Fes1A (AT3G09350), Fes1B (AT3G53800), Fes1C (AT5G02150). | Fes1C | Fes1C |
AT5G00820 | AT5G00820 | 279 | Chr5: 424426-424704 | A. thaliana | Natural antisense transcript overlaps with AT5G02150;(source:Araport11) | NULL |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G02140.2 | 982 | Chr5: 423202-424277 |
AT5G02150.1 | 1213 | Chr5: 424291-426116 |
AT5G02150.2 | 1156 | Chr5: 424293-426057 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G02140:three_prime_UTR:1 | 68 | Chr5: 424210-424277 | Arabidopsis thaliana |
AT5G02150:three_prime_UTR:2 | 190 | Chr5: 424291-424480 | Arabidopsis thaliana |
AT5G02150:three_prime_UTR:1 | 188 | Chr5: 424293-424480 | Arabidopsis thaliana |