Genomics
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G01225:CDS:1 | 405 | Chr5: 91920-92324 | Arabidopsis thaliana |
AT5G01230:CDS:12 | 221 | Chr5: 92789-93009 | Arabidopsis thaliana |
AT5G01230:CDS:11 | 108 | Chr5: 93289-93396 | Arabidopsis thaliana |
AT5G01230:CDS:10 | 64 | Chr5: 93521-93584 | Arabidopsis thaliana |
AT5G01230:CDS:9 | 93 | Chr5: 93734-93826 | Arabidopsis thaliana |
AT5G01230:CDS:8 | 53 | Chr5: 93949-94001 | Arabidopsis thaliana |
AT5G01230:CDS:7 | 61 | Chr5: 94086-94146 | Arabidopsis thaliana |
AT5G01230:CDS:6 | 109 | Chr5: 94264-94372 | Arabidopsis thaliana |
AT5G01230:CDS:5 | 50 | Chr5: 94482-94531 | Arabidopsis thaliana |
AT5G01230:CDS:3 | 50 | Chr5: 94948-94997 | Arabidopsis thaliana |
AT5G01230:CDS:2 | 94 | Chr5: 95155-95248 | Arabidopsis thaliana |
AT5G01230:CDS:1 | 27 | Chr5: 95354-95380 | Arabidopsis thaliana |
AT5G01230:CDS:4 | 15 | Chr5: 94694-94708 | Arabidopsis thaliana |
AT5G01230:CDS:3.1 | 50 | Chr5: 94948-94997 | Arabidopsis thaliana |
AT5G01230:CDS:2.1 | 94 | Chr5: 95155-95248 | Arabidopsis thaliana |
AT5G01230:CDS:1.1 | 27 | Chr5: 95354-95380 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G01225:exon:1 | 653 | Chr5: 91786-92438 | Arabidopsis thaliana |
AT5G01230:exon:16 | 1172 | Chr5: 91838-93009 | Arabidopsis thaliana |
AT5G01230:exon:11 | 53 | Chr5: 93949-94001 | Arabidopsis thaliana |
AT5G01230:exon:9 | 61 | Chr5: 94086-94146 | Arabidopsis thaliana |
AT5G01230:exon:7 | 50 | Chr5: 94482-94531 | Arabidopsis thaliana |
AT5G01230:exon:1 | 120 | Chr5: 95582-95701 | Arabidopsis thaliana |
AT5G01230:exon:15 | 409 | Chr5: 92601-93009 | Arabidopsis thaliana |
AT5G01230:exon:14 | 108 | Chr5: 93289-93396 | Arabidopsis thaliana |
AT5G01230:exon:13 | 64 | Chr5: 93521-93584 | Arabidopsis thaliana |
AT5G01230:exon:12 | 93 | Chr5: 93734-93826 | Arabidopsis thaliana |
AT5G01230:exon:10 | 198 | Chr5: 93949-94146 | Arabidopsis thaliana |
AT5G01230:exon:8 | 109 | Chr5: 94264-94372 | Arabidopsis thaliana |
AT5G01230:exon:6 | 227 | Chr5: 94482-94708 | Arabidopsis thaliana |
AT5G01230:exon:5 | 50 | Chr5: 94948-94997 | Arabidopsis thaliana |
AT5G01230:exon:4 | 94 | Chr5: 95155-95248 | Arabidopsis thaliana |
AT5G01230:exon:3 | 58 | Chr5: 95354-95411 | Arabidopsis thaliana |
AT5G01230:exon:2 | 105 | Chr5: 95582-95686 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G01225:five_prime_UTR:1 | 134 | Chr5: 91786-91919 | Arabidopsis thaliana |
AT5G01230:five_prime_UTR:1 | 120 | Chr5: 95582-95701 | Arabidopsis thaliana |
AT5G01230:five_prime_UTR:3 | 31 | Chr5: 95381-95411 | Arabidopsis thaliana |
AT5G01230:five_prime_UTR:2 | 105 | Chr5: 95582-95686 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G01225 | locus:504955018 | AT5G01225 | 653 | Chr5: 91786-92438 | A. thaliana | josephin-like protein;(source:Araport11) | NULL | NULL | ||
AT5G01230 | locus:2150069 | AT5G01230 | 3864 | Chr5: 91838-95701 | A. thaliana | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) | Encodes a tRNA methyltransferase that mediates the 2'-O-ribose methylation of selected tRNA species in the anticodon loop. Mutation of this gene compromises plant immunity against bacteria. | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | AtTRM7a, SCS9, TRM7a |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G01225.1 | 653 | Chr5: 91786-92438 |
AT5G01230.2 | 1515 | Chr5: 92601-95686 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G01225:three_prime_UTR:1 | 114 | Chr5: 92325-92438 | Arabidopsis thaliana |
AT5G01230:three_prime_UTR:8 | 951 | Chr5: 91838-92788 | Arabidopsis thaliana |
AT5G01230:three_prime_UTR:7 | 409 | Chr5: 92601-93009 | Arabidopsis thaliana |
AT5G01230:three_prime_UTR:6 | 108 | Chr5: 93289-93396 | Arabidopsis thaliana |
AT5G01230:three_prime_UTR:5 | 64 | Chr5: 93521-93584 | Arabidopsis thaliana |
AT5G01230:three_prime_UTR:4 | 93 | Chr5: 93734-93826 | Arabidopsis thaliana |
AT5G01230:three_prime_UTR:3 | 198 | Chr5: 93949-94146 | Arabidopsis thaliana |
AT5G01230:three_prime_UTR:2 | 109 | Chr5: 94264-94372 | Arabidopsis thaliana |
AT5G01230:three_prime_UTR:1 | 212 | Chr5: 94482-94693 | Arabidopsis thaliana |