Genomics
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G35040:CDS:1 | 757 | Chr4: 16680821-16681577 | Arabidopsis thaliana |
AT4G35040:CDS:2 | 29 | Chr4: 16681777-16681805 | Arabidopsis thaliana |
AT4G35040:CDS:1.1 | 757 | Chr4: 16680821-16681577 | Arabidopsis thaliana |
AT4G35040:CDS:2.1 | 29 | Chr4: 16681777-16681805 | Arabidopsis thaliana |
AT4G35040:CDS:1.2 | 757 | Chr4: 16680821-16681577 | Arabidopsis thaliana |
AT4G35040:CDS:2.2 | 29 | Chr4: 16681777-16681805 | Arabidopsis thaliana |
AT4G35040:CDS:1.3 | 757 | Chr4: 16680821-16681577 | Arabidopsis thaliana |
AT4G35040:CDS:2.3 | 29 | Chr4: 16681777-16681805 | Arabidopsis thaliana |
AT4G35050:CDS:6 | 265 | Chr4: 16682752-16683016 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G35040:exon:6 | 1105 | Chr4: 16681777-16682881 | Arabidopsis thaliana |
AT4G35040:exon:1 | 402 | Chr4: 16680209-16680610 | Arabidopsis thaliana |
AT4G35040:exon:5 | 466 | Chr4: 16681777-16682242 | Arabidopsis thaliana |
AT4G35040:exon:10 | 546 | Chr4: 16682336-16682881 | Arabidopsis thaliana |
AT4G35040:exon:8 | 373 | Chr4: 16682186-16682558 | Arabidopsis thaliana |
AT4G35040:exon:2 | 288 | Chr4: 16680323-16680610 | Arabidopsis thaliana |
AT4G35040:exon:3 | 869 | Chr4: 16680709-16681577 | Arabidopsis thaliana |
AT4G35040:exon:4 | 123 | Chr4: 16681777-16681899 | Arabidopsis thaliana |
AT4G35040:exon:7 | 57 | Chr4: 16682186-16682242 | Arabidopsis thaliana |
AT4G35040:exon:9 | 223 | Chr4: 16682336-16682558 | Arabidopsis thaliana |
AT4G35050:exon:6 | 437 | Chr4: 16682580-16683016 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G35040:five_prime_UTR:1 | 402 | Chr4: 16680209-16680610 | Arabidopsis thaliana |
AT4G35040:five_prime_UTR:2 | 288 | Chr4: 16680323-16680610 | Arabidopsis thaliana |
AT4G35040:five_prime_UTR:3 | 112 | Chr4: 16680709-16680820 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT4G35040 | locus:2131626 | bZIP19 | 2673 | Chr4: 16680209-16682881 | A. thaliana | Basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11) | Basic-region leucine zipper (bZIP19) transcription factor involved in the adaptation to zinc deficiency. Binds ZDRE motifs. | Basic-leucine zipper (bZIP) transcription factor family protein | AtbZIP19, bZIP19 | |
AT4G35050 | locus:2131551 | MSI3 | MULTICOPY SUPPRESSOR OF IRA1 3 | 2349 | Chr4: 16682580-16684928 | A. thaliana | Transducin family protein / WD-40 repeat family protein;(source:Araport11) | Encodes a WD-40 repeat protein similar to yeast MSI1. The predicted protein has a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase | Transducin family protein / WD-40 repeat family protein | MSI3, NFC3 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G35040.1 | 2283 | Chr4: 16680209-16682881 |
AT4G35040.3 | 1653 | Chr4: 16680323-16682558 |
AT4G35040.4 | 1560 | Chr4: 16680323-16682558 |
AT4G35050.1 | 1624 | Chr4: 16682580-16684928 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G35040:three_prime_UTR:3 | 1076 | Chr4: 16681806-16682881 | Arabidopsis thaliana |
AT4G35040:three_prime_UTR:2 | 437 | Chr4: 16681806-16682242 | Arabidopsis thaliana |
AT4G35040:three_prime_UTR:7 | 546 | Chr4: 16682336-16682881 | Arabidopsis thaliana |
AT4G35040:three_prime_UTR:5 | 373 | Chr4: 16682186-16682558 | Arabidopsis thaliana |
AT4G35040:three_prime_UTR:1 | 94 | Chr4: 16681806-16681899 | Arabidopsis thaliana |
AT4G35040:three_prime_UTR:4 | 57 | Chr4: 16682186-16682242 | Arabidopsis thaliana |
AT4G35040:three_prime_UTR:6 | 223 | Chr4: 16682336-16682558 | Arabidopsis thaliana |
AT4G35050:three_prime_UTR:1 | 172 | Chr4: 16682580-16682751 | Arabidopsis thaliana |