Genomics
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G30200:CDS:7 | 1100 | Chr4: 14786852-14787951 | Arabidopsis thaliana |
AT4G30200:CDS:4 | 630 | Chr4: 14788034-14788663 | Arabidopsis thaliana |
AT4G30200:CDS:2 | 396 | Chr4: 14788740-14789135 | Arabidopsis thaliana |
AT4G30200:CDS:1 | 19 | Chr4: 14790052-14790070 | Arabidopsis thaliana |
AT4G30200:CDS:8 | 1064 | Chr4: 14786852-14787915 | Arabidopsis thaliana |
AT4G30200:CDS:4.1 | 630 | Chr4: 14788034-14788663 | Arabidopsis thaliana |
AT4G30200:CDS:2.1 | 396 | Chr4: 14788740-14789135 | Arabidopsis thaliana |
AT4G30200:CDS:1.1 | 19 | Chr4: 14790052-14790070 | Arabidopsis thaliana |
AT4G30200:CDS:6 | 17 | Chr4: 14787045-14787061 | Arabidopsis thaliana |
AT4G30200:CDS:5 | 813 | Chr4: 14787139-14787951 | Arabidopsis thaliana |
AT4G30200:CDS:4.2 | 630 | Chr4: 14788034-14788663 | Arabidopsis thaliana |
AT4G30200:CDS:2.2 | 396 | Chr4: 14788740-14789135 | Arabidopsis thaliana |
AT4G30200:CDS:1.2 | 19 | Chr4: 14790052-14790070 | Arabidopsis thaliana |
AT4G30200:CDS:8.1 | 1064 | Chr4: 14786852-14787915 | Arabidopsis thaliana |
AT4G30200:CDS:4.3 | 630 | Chr4: 14788034-14788663 | Arabidopsis thaliana |
AT4G30200:CDS:3 | 364 | Chr4: 14788740-14789103 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G30200:exon:8 | 1420 | Chr4: 14786532-14787951 | Arabidopsis thaliana |
AT4G30200:exon:9 | 1384 | Chr4: 14786532-14787915 | Arabidopsis thaliana |
AT4G30200:exon:7 | 429 | Chr4: 14786633-14787061 | Arabidopsis thaliana |
AT4G30200:exon:5 | 813 | Chr4: 14787139-14787951 | Arabidopsis thaliana |
AT4G30200:exon:2 | 94 | Chr4: 14790052-14790145 | Arabidopsis thaliana |
AT4G30200:exon:6 | 1283 | Chr4: 14786633-14787915 | Arabidopsis thaliana |
AT4G30200:exon:4 | 630 | Chr4: 14788034-14788663 | Arabidopsis thaliana |
AT4G30200:exon:3 | 396 | Chr4: 14788740-14789135 | Arabidopsis thaliana |
AT4G30200:exon:1 | 223 | Chr4: 14790279-14790501 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G30200:five_prime_UTR:2 | 75 | Chr4: 14790071-14790145 | Arabidopsis thaliana |
AT4G30200:five_prime_UTR:3 | 32 | Chr4: 14789104-14789135 | Arabidopsis thaliana |
AT4G30200:five_prime_UTR:1 | 223 | Chr4: 14790279-14790501 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT4G30200 | locus:2128946 | VEL1 | vernalization5/VIN3-like 1 | 3970 | Chr4: 14786532-14790501 | A. thaliana | vernalization5/VIN3-like protein;(source:Araport11) | Encodes a protein with similarity to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain. VEL1 is a part of a polycomb repressive complex (PRC2) that is involved in epigenetic silencing of the FLC flowering locus. | vernalization5/VIN3-like | VEL1, VIL2 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G30200.3 | 2727 | Chr4: 14786532-14790501 |
AT4G30200.4 | 2585 | Chr4: 14786633-14790501 |
AT4G30200.1 | 2532 | Chr4: 14786633-14790501 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G30200:three_prime_UTR:3 | 320 | Chr4: 14786532-14786851 | Arabidopsis thaliana |
AT4G30200:three_prime_UTR:1 | 412 | Chr4: 14786633-14787044 | Arabidopsis thaliana |
AT4G30200:three_prime_UTR:2 | 219 | Chr4: 14786633-14786851 | Arabidopsis thaliana |