Genomics
Genome feature
| Region: |
mRNA
|
Length: |
1405
 |
| Location: | Chr4:14125212-14127082 reverse strand | ||
| Transcript | Exons | Introns | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
MRL7
AT4G28590.1
1405 |
|
|
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT4G28590:CDS:4 |
104
|
Chr4: 14125367-14125470 | Arabidopsis thaliana |
| AT4G28590:CDS:3 |
112
|
Chr4: 14125560-14125671 | Arabidopsis thaliana |
| AT4G28590:CDS:2 |
85
|
Chr4: 14125804-14125888 | Arabidopsis thaliana |
| AT4G28590:CDS:1 |
695
|
Chr4: 14126134-14126828 | Arabidopsis thaliana |
Exons
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT4G28590:exon:4 |
259
|
Chr4: 14125212-14125470 | Arabidopsis thaliana |
| AT4G28590:exon:3 |
112
|
Chr4: 14125560-14125671 | Arabidopsis thaliana |
| AT4G28590:exon:2 |
85
|
Chr4: 14125804-14125888 | Arabidopsis thaliana |
| AT4G28590:exon:1 |
949
|
Chr4: 14126134-14127082 | Arabidopsis thaliana |
Five Prime UTRs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT4G28590:five_prime_UTR:1 |
254
|
Chr4: 14126829-14127082 | Arabidopsis thaliana |
Genes
| DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
|---|---|---|---|---|---|---|---|---|---|---|
| AT4G28590 | locus:2139850 | MRL7 | Mesophyll-cell RNAi Library line 7 |
1871
|
Chr4: 14125212-14127082 | A. thaliana | polyadenylate-binding protein 2-binding protein;(source:Araport11) | Encodes a dual-targeted nuclear/plastidial phytochrome signaling component required for PEP assembly. It controls PhAPG expression primarily from the nucleus by interacting with phytochromes and promoting their localization to photobodies for the degradation of the transcriptional regulators PIF1 and PIF3. RCB-dependent PIF degradation in the nucleus signals the plastids for PEP assembly and PhAPG expression. | NULL | AtECB1, ECB1, MRL7, PDE333, RCB, SVR4 |
Three Prime UTRs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT4G28590:three_prime_UTR:1 |
155
|
Chr4: 14125212-14125366 | Arabidopsis thaliana |
