Genomics
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G27030:CDS:1 | 972 | Chr4: 13571951-13572922 | Arabidopsis thaliana |
AT4G27040:CDS:7 | 102 | Chr4: 13573061-13573162 | Arabidopsis thaliana |
AT4G27040:CDS:6 | 90 | Chr4: 13573284-13573373 | Arabidopsis thaliana |
AT4G27040:CDS:5 | 108 | Chr4: 13573491-13573598 | Arabidopsis thaliana |
AT4G27040:CDS:4 | 155 | Chr4: 13573698-13573852 | Arabidopsis thaliana |
AT4G27040:CDS:3 | 136 | Chr4: 13574031-13574166 | Arabidopsis thaliana |
AT4G27040:CDS:2 | 111 | Chr4: 13574327-13574437 | Arabidopsis thaliana |
AT4G27040:CDS:1 | 51 | Chr4: 13574526-13574576 | Arabidopsis thaliana |
AT4G27040:CDS:7.1 | 102 | Chr4: 13573061-13573162 | Arabidopsis thaliana |
AT4G27040:CDS:6.1 | 90 | Chr4: 13573284-13573373 | Arabidopsis thaliana |
AT4G27040:CDS:5.1 | 108 | Chr4: 13573491-13573598 | Arabidopsis thaliana |
AT4G27040:CDS:4.1 | 155 | Chr4: 13573698-13573852 | Arabidopsis thaliana |
AT4G27040:CDS:3.1 | 136 | Chr4: 13574031-13574166 | Arabidopsis thaliana |
AT4G27040:CDS:2.1 | 111 | Chr4: 13574327-13574437 | Arabidopsis thaliana |
AT4G27040:CDS:1.1 | 51 | Chr4: 13574526-13574576 | Arabidopsis thaliana |
AT4G27040:CDS:7.2 | 102 | Chr4: 13573061-13573162 | Arabidopsis thaliana |
AT4G27040:CDS:6.2 | 90 | Chr4: 13573284-13573373 | Arabidopsis thaliana |
AT4G27040:CDS:5.2 | 108 | Chr4: 13573491-13573598 | Arabidopsis thaliana |
AT4G27040:CDS:4.2 | 155 | Chr4: 13573698-13573852 | Arabidopsis thaliana |
AT4G27040:CDS:3.2 | 136 | Chr4: 13574031-13574166 | Arabidopsis thaliana |
AT4G27040:CDS:2.2 | 111 | Chr4: 13574327-13574437 | Arabidopsis thaliana |
AT4G27040:CDS:1.2 | 51 | Chr4: 13574526-13574576 | Arabidopsis thaliana |
AT4G27040:CDS:7.3 | 102 | Chr4: 13573061-13573162 | Arabidopsis thaliana |
AT4G27040:CDS:6.3 | 90 | Chr4: 13573284-13573373 | Arabidopsis thaliana |
AT4G27040:CDS:5.3 | 108 | Chr4: 13573491-13573598 | Arabidopsis thaliana |
AT4G27040:CDS:4.3 | 155 | Chr4: 13573698-13573852 | Arabidopsis thaliana |
AT4G27040:CDS:3.3 | 136 | Chr4: 13574031-13574166 | Arabidopsis thaliana |
AT4G27040:CDS:2.3 | 111 | Chr4: 13574327-13574437 | Arabidopsis thaliana |
AT4G27040:CDS:1.3 | 51 | Chr4: 13574526-13574576 | Arabidopsis thaliana |
AT4G27040:CDS:7.4 | 102 | Chr4: 13573061-13573162 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G27030:exon:1 | 1150 | Chr4: 13571921-13573070 | Arabidopsis thaliana |
AT4G27040:exon:8 | 147 | Chr4: 13574949-13575095 | Arabidopsis thaliana |
AT4G27040:exon:3 | 79 | Chr4: 13575226-13575304 | Arabidopsis thaliana |
AT4G27040:exon:21 | 278 | Chr4: 13572885-13573162 | Arabidopsis thaliana |
AT4G27040:exon:6 | 481 | Chr4: 13574949-13575429 | Arabidopsis thaliana |
AT4G27040:exon:20 | 274 | Chr4: 13572889-13573162 | Arabidopsis thaliana |
AT4G27040:exon:12 | 148 | Chr4: 13574526-13574673 | Arabidopsis thaliana |
AT4G27040:exon:9 | 133 | Chr4: 13574949-13575081 | Arabidopsis thaliana |
AT4G27040:exon:4 | 74 | Chr4: 13575226-13575299 | Arabidopsis thaliana |
AT4G27040:exon:13 | 97 | Chr4: 13574526-13574622 | Arabidopsis thaliana |
AT4G27040:exon:10 | 111 | Chr4: 13574742-13574852 | Arabidopsis thaliana |
AT4G27040:exon:5 | 690 | Chr4: 13574949-13575638 | Arabidopsis thaliana |
AT4G27040:exon:19 | 102 | Chr4: 13573061-13573162 | Arabidopsis thaliana |
AT4G27040:exon:18 | 90 | Chr4: 13573284-13573373 | Arabidopsis thaliana |
AT4G27040:exon:17 | 108 | Chr4: 13573491-13573598 | Arabidopsis thaliana |
AT4G27040:exon:16 | 155 | Chr4: 13573698-13573852 | Arabidopsis thaliana |
AT4G27040:exon:15 | 136 | Chr4: 13574031-13574166 | Arabidopsis thaliana |
AT4G27040:exon:14 | 111 | Chr4: 13574327-13574437 | Arabidopsis thaliana |
AT4G27040:exon:11 | 327 | Chr4: 13574526-13574852 | Arabidopsis thaliana |
AT4G27040:exon:7 | 351 | Chr4: 13574949-13575299 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G27040:five_prime_UTR:8 | 147 | Chr4: 13574949-13575095 | Arabidopsis thaliana |
AT4G27040:five_prime_UTR:3 | 79 | Chr4: 13575226-13575304 | Arabidopsis thaliana |
AT4G27040:five_prime_UTR:6 | 481 | Chr4: 13574949-13575429 | Arabidopsis thaliana |
AT4G27040:five_prime_UTR:12 | 97 | Chr4: 13574577-13574673 | Arabidopsis thaliana |
AT4G27040:five_prime_UTR:9 | 133 | Chr4: 13574949-13575081 | Arabidopsis thaliana |
AT4G27040:five_prime_UTR:4 | 74 | Chr4: 13575226-13575299 | Arabidopsis thaliana |
AT4G27040:five_prime_UTR:13 | 46 | Chr4: 13574577-13574622 | Arabidopsis thaliana |
AT4G27040:five_prime_UTR:10 | 111 | Chr4: 13574742-13574852 | Arabidopsis thaliana |
AT4G27040:five_prime_UTR:5 | 690 | Chr4: 13574949-13575638 | Arabidopsis thaliana |
AT4G27040:five_prime_UTR:11 | 276 | Chr4: 13574577-13574852 | Arabidopsis thaliana |
AT4G27040:five_prime_UTR:7 | 351 | Chr4: 13574949-13575299 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT4G27030 | locus:2116352 | FADA | fatty acid desaturase A | 1258 | Chr4: 13571813-13573070 | A. thaliana | fatty acid desaturase A;(source:Araport11) | Encodes an unusual palmitate desaturase that is highly substrate specific. It introduces a delta-3 trans double bond at palmitate at the sn-2 position of phosphatidylglycerol. The mRNA is cell-to-cell mobile. | fatty acid desaturase A | FAD4, FADA |
AT4G27040 | locus:2116357 | VPS22 | 2755 | Chr4: 13572885-13575639 | A. thaliana | EAP30/Vps36 family protein;(source:Araport11) | NULL | EAP30/Vps36 family protein | VPS22 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G27030.1 | 1150 | Chr4: 13571813-13573070 |
AT4G27040.2 | 1618 | Chr4: 13572885-13575429 |
AT4G27040.4 | 1530 | Chr4: 13572889-13575639 |
AT4G27040.1 | 1581 | Chr4: 13572889-13575639 |
AT4G27040.6 | 1600 | Chr4: 13573061-13575638 |
AT4G27040.5 | 1620 | Chr4: 13573061-13575638 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G27030:three_prime_UTR:1 | 148 | Chr4: 13572923-13573070 | Arabidopsis thaliana |
AT4G27040:three_prime_UTR:2 | 176 | Chr4: 13572885-13573060 | Arabidopsis thaliana |
AT4G27040:three_prime_UTR:1 | 172 | Chr4: 13572889-13573060 | Arabidopsis thaliana |