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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs: 10, Exons: 8, Five Prime UTRs: 2, Gene: 1, mRNAs: 3, Three Prime UTRs: 2, Transposable Element: 1, Transposon Fragment: 1
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G20290:CDS:1 | 426 | Chr4: 10955159-10955584 | Arabidopsis thaliana |
AT4G20300:CDS:1 | 8 | Chr4: 10955813-10955820 | Arabidopsis thaliana |
AT4G20300:CDS:2 | 534 | Chr4: 10956285-10956818 | Arabidopsis thaliana |
AT4G20300:CDS:3 | 382 | Chr4: 10957705-10958086 | Arabidopsis thaliana |
AT4G20300:CDS:4 | 78 | Chr4: 10958192-10958269 | Arabidopsis thaliana |
AT4G20300:CDS:6 | 57 | Chr4: 10958809-10958865 | Arabidopsis thaliana |
AT4G20300:CDS:1.1 | 8 | Chr4: 10955813-10955820 | Arabidopsis thaliana |
AT4G20300:CDS:2.1 | 534 | Chr4: 10956285-10956818 | Arabidopsis thaliana |
AT4G20300:CDS:3.1 | 382 | Chr4: 10957705-10958086 | Arabidopsis thaliana |
AT4G20300:CDS:5 | 96 | Chr4: 10958192-10958287 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G20290:exon:1 | 426 | Chr4: 10955159-10955584 | Arabidopsis thaliana |
AT4G20300:exon:1 | 510 | Chr4: 10955311-10955820 | Arabidopsis thaliana |
AT4G20300:exon:5 | 78 | Chr4: 10958192-10958269 | Arabidopsis thaliana |
AT4G20300:exon:7 | 431 | Chr4: 10958809-10959239 | Arabidopsis thaliana |
AT4G20300:exon:2 | 360 | Chr4: 10955461-10955820 | Arabidopsis thaliana |
AT4G20300:exon:3 | 534 | Chr4: 10956285-10956818 | Arabidopsis thaliana |
AT4G20300:exon:4 | 382 | Chr4: 10957705-10958086 | Arabidopsis thaliana |
AT4G20300:exon:6 | 662 | Chr4: 10958192-10958853 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G20300:five_prime_UTR:1 | 502 | Chr4: 10955311-10955812 | Arabidopsis thaliana |
AT4G20300:five_prime_UTR:2 | 352 | Chr4: 10955461-10955812 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT4G20290 | locus:2120332 | AT4G20290 | 426 | Chr4: 10955159-10955584 | A. thaliana | transmembrane protein;(source:Araport11) | NULL | NULL |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G20290.1 | 426 | Chr4: 10955159-10955584 |
AT4G20300.2 | 1935 | Chr4: 10955311-10959239 |
AT4G20300.1 | 1938 | Chr4: 10955461-10958853 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G20300:three_prime_UTR:2 | 374 | Chr4: 10958866-10959239 | Arabidopsis thaliana |
AT4G20300:three_prime_UTR:1 | 566 | Chr4: 10958288-10958853 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4TE50250 | 104 | Chr4: 10955821-10955924 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4TE50250:transposon_fragment:1 | 104 | Chr4: 10955821-10955924 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...