Genomics
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs: 6, Exons: 7, Five Prime UTRs: 2, Gene: 1, Three Prime UTR: 1, Transposable Elements: 2, Transposon Fragments: 2
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G11060:CDS:6 | 17 | Chr4: 6754820-6754836 | Arabidopsis thaliana |
AT4G11060:CDS:5 | 60 | Chr4: 6754924-6754983 | Arabidopsis thaliana |
AT4G11060:CDS:4 | 101 | Chr4: 6755056-6755156 | Arabidopsis thaliana |
AT4G11060:CDS:3 | 209 | Chr4: 6755460-6755668 | Arabidopsis thaliana |
AT4G11060:CDS:2 | 158 | Chr4: 6755925-6756082 | Arabidopsis thaliana |
AT4G11060:CDS:1 | 61 | Chr4: 6756170-6756230 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G11060:exon:7 | 322 | Chr4: 6754515-6754836 | Arabidopsis thaliana |
AT4G11060:exon:6 | 60 | Chr4: 6754924-6754983 | Arabidopsis thaliana |
AT4G11060:exon:5 | 101 | Chr4: 6755056-6755156 | Arabidopsis thaliana |
AT4G11060:exon:4 | 209 | Chr4: 6755460-6755668 | Arabidopsis thaliana |
AT4G11060:exon:3 | 158 | Chr4: 6755925-6756082 | Arabidopsis thaliana |
AT4G11060:exon:2 | 88 | Chr4: 6756170-6756257 | Arabidopsis thaliana |
AT4G11060:exon:1 | 201 | Chr4: 6756395-6756595 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G11060:five_prime_UTR:2 | 27 | Chr4: 6756231-6756257 | Arabidopsis thaliana |
AT4G11060:five_prime_UTR:1 | 201 | Chr4: 6756395-6756595 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT4G11060 | locus:2136083 | MTSSB | mitochondrially targeted single-stranded DNA binding protein | 2081 | Chr4: 6754515-6756595 | A. thaliana | mitochondrially targeted single-stranded DNA binding protein;(source:Araport11) | Participates in a minimal functioning DNA replisome in plant chloroplasts and mitochondria which consists of the DNA primase-helicase protein Twinkle along with DNA polymerase 1A or 1B. ABA responsive gene involved in mitochondrial RNA processing. | mitochondrially targeted single-stranded DNA binding protein | MTSSB, SBB1 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G11060:three_prime_UTR:1 | 305 | Chr4: 6754515-6754819 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4TE29025 | 270 | Chr4: 6754327-6754596 | Arabidopsis thaliana |
AT4TE29035 | 1152 | Chr4: 6756591-6757742 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4TE29025:transposon_fragment:1 | 270 | Chr4: 6754327-6754596 | Arabidopsis thaliana |
AT4TE29035:transposon_fragment:1 | 1152 | Chr4: 6756591-6757742 | Arabidopsis thaliana |