Genomics
Overlapping Features
Genome features that overlap coordinates of this TransposableElement
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G09700:exon:1 | 1116 | Chr4: 6126775-6127890 | Arabidopsis thaliana |
AT4G09710:exon:1 | 3911 | Chr4: 6128688-6132598 | Arabidopsis thaliana |
Intergenic Regions
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
intergenic_region_chrChr4_6127891..6128687 | 797 | Chr4: 6127891-6128687 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G09700.1 | 1116 | Chr4: 6126775-6127890 |
AT4G09710.1 | 3911 | Chr4: 6128688-6132598 |
Transposable Element Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT4G09700 | locus:2118475 | AT4G09700 | 1116 | Chr4: 6126775-6127890 | A. thaliana | transposable_element_gene;(source:Araport11);similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G06820.1);(source:TAIR10) | NULL | transposable element gene | ||
AT4G09710 | locus:2118490 | AT4G09710 | 3911 | Chr4: 6128688-6132598 | A. thaliana | transposable_element_gene;(source:Araport11);non-LTR retrotransposon family (LINE), has a 4.7e-40 P-value blast match to GB:AAB41224 ORF2 (LINE-element) (Rattus norvegicus);(source:TAIR10) | NULL | transposable element gene |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4TE25865:transposon_fragment:1 | 571 | Chr4: 6126851-6127421 | Arabidopsis thaliana |
AT4TE25865:transposon_fragment:2 | 3530 | Chr4: 6128545-6132074 | Arabidopsis thaliana |